Variovorax paradoxus EPS: Varpa_3192
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Entry
Varpa_3192 CDS
T01392
Name
(GenBank) extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3192
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_3192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3192
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_3192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Glycos_transf_2
LeuA_dimer
Motif
Other DBs
NCBI-ProteinID:
ADU37378
UniProt:
E6V9Z4
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All DBs
Position
complement(3429929..3431158)
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AA seq
409 aa
AA seq
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MQFALKSVAACAMLVSVTAAFAQKGETVKIAWLDPLSGLMAAVGTNQLKTTQFLAEEFNK
KNASGVKFEIIAIDNKLSPQETTAALRSAQDQGARYITQGNGSGPALAIIDAIEKNNARN
PGKELLYLNYAAVDPDLTNSKCSYWHFRLDADTSMKMEALTTWMKDQTDIKKVYILGQNY
AHGVQVSKFAKEDLKVKRPDIQIVGDDLHPLAQVRDFSPYIAKIKASGADTVITGNWGSD
LSLLIKAANDSGLDVKFLTYYAPGAGTPTAMGATSAGKVYTVAYAHYNMGGEIQKLLAGY
KKKMNDDLTQSSIYHTFALLDAAFVQTKSTDPVKVAAALEGMKIKSFNGEVEMRKADHQL
QQGLYISRWEKASAKYPYDAENTGYTNVPVKYYESYVASTPTTCQMKRP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgctctcaagtcagtcgctgcttgtgccatgttggtgagcgtgaccgccgcc
ttcgcccagaagggggaaacggtcaagatcgcctggctcgatccgctgtcggggctgatg
gccgccgtgggcaccaaccagctcaagacgacgcagttcctggccgaagagttcaacaag
aagaacgcgtcgggcgtgaagttcgagatcatcgccatcgacaacaagctgagcccgcag
gaaaccaccgccgcgctgcgctcggcgcaggaccagggtgcgcgctacatcacccagggc
aacggctcgggcccggcgctggcgatcatcgatgccatcgagaagaacaacgcgcgcaat
ccgggcaaggaactgctctacctgaactacgcggcggtcgaccccgacctcaccaacagc
aagtgcagctattggcactttcgcctcgatgccgacacctccatgaagatggaggcgctg
accacctggatgaaggaccagaccgacatcaagaaggtctacatcctcgggcagaactac
gcgcacggcgtgcaggtgtcgaagttcgccaaggaagacctgaaggtcaagcgccccgac
atccagatcgtgggcgacgacctgcatccgctcgcgcaggtgcgcgacttctcgccctac
atcgccaagatcaaggcttcgggcgcggacacggtcatcaccggcaactggggttccgac
ctctcgctgctcatcaaggcggcgaacgactcggggctggacgtcaagttcctgacgtat
tacgcaccgggcgccggcacgccaacggccatgggcgccacctcggcaggcaaggtctac
accgtggcctatgcccactacaacatgggcggcgagatccagaagctgctcgccggctac
aagaagaagatgaacgacgacctcacgcagtcgtcgatctatcacacgttcgcgttgctc
gatgcggccttcgtgcagaccaagtcgaccgatccggtcaaggtcgcggccgcgctggag
ggcatgaagatcaagagcttcaacggcgaggtcgagatgcgcaaggccgaccaccagttg
cagcagggcctgtacatctcgcgctgggagaaggcgagcgccaagtacccctacgacgcc
gagaacaccggctacacgaacgtccccgtgaagtactacgagtcgtatgtggcgagcacg
ccgacgacctgccagatgaagcgcccctag
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