Variovorax paradoxus EPS: Varpa_3211
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Entry
Varpa_3211 CDS
T01392
Name
(GenBank) cellulose synthase operon C domain protein
KO
K20543
cellulose synthase operon protein C
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3211
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_3211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCSC_C
TPR_19
TPR_16
TPR_14
TPR_17
TPR_2
TPR_8
TPR_12
TPR_7
TPR_11
ANAPC3
TPR_9
ChAPs
TPR-S
Motif
Other DBs
NCBI-ProteinID:
ADU37397
UniProt:
E6VA13
LinkDB
All DBs
Position
3456549..3460898
Genome browser
AA seq
1449 aa
AA seq
DB search
MSTHPSGMKPLCPPWLRRGPGRIPASQWMACLGLLAAVCASNPARAQADASAALVEQGNY
WQTQGRADLAEESWRKLLRVDPQSADAMYGMAQVELSRGNAEPARSWISRLRAAHPNDSR
LARLQQQAQQPGQGSTLQRARAAARAGRGAEAVELYRSQFDNRPPPEALALEYYQVLSST
PQGADEARKGIEQLVKDHPDNANYKLALAQLRTYSESTRREGIRSLVELARQPTVGTAAR
TSWRQALIWLDARAPDIPLYQDYLASNPNDAAVSARLETLTSGKTAAAASPGVPLGEGFR
ALDRGDPATAEQRFQQALRTKADDPEALGGLGLVRLRQERFGEAQELLERAARGSGGSKW
NSALQSATYWSLVGQARAAREKNDARGAQSLLERAVRIDPRESVGQVALADLRAAAGELP
QAEQGYKRVLESKPSDTQALRGLIAVYGRQGRADEALALARQLTPEQASQLSGLRDIQVE
QARAKARQQADAGDAPGAQRTLEDAMLAAPDSPWVRLDLANIYRRQGLVAEARGVMEGLL
MSQPDMPDALYASALLASESGDAAGGIQYLERIPAASRTRDMAALQRRLWAQSQAQRAQA
LARQGQVDAARQVLGQAEAALSSDMPAELWGQLAGAYAEIGDAPRALAMSRQLLARSPNP
GIGDRLLYASVLLKTKQDVELSAVLRQLQPAGMTAAQRSDFDSLRIAFALRQTDALREAG
NLEAAYNAMAPVLAERPDDPRAMAALARLYSAARDETQALALYQRVLQRSPTDLDALLAA
AASASALRQHSEAENYVMAALKQAPDQSRVLAAAGRVYRNAGDSRKAEQYLRAAVDADSR
VATGFAPGVAPGGLPAANPFAGMTGGAPGTAAPGAYPSAAGNPFAQARMQPVVYAAAPAY
APAYPAAPPAYPAYPAAPANTGYPVAGAAPGALPWASGPAPAPAANSKGRRTATATASSR
NAAARNTPQASAYIAPPATQQYPVAGMQPVAPVYAQAPQPGSYPQAYPPAYPYPQAGAAP
LPVPGAGNTGWNAPLRAAAPADPVAAELRELQAQRSISLTAGTVYRNRAGEAGLSQLSDF
QIPIEARFPVGEGKIVVGVTPTVLDAGTPSADYPTGSRFGGGPGAAITGLQNGTSAGQQN
ASGVGLSVGYEGKNFGASIGTTPLGFPETNVVGNVSYAGSFGDSWNAKVDVSRRAVTDSL
LSFAGAKDQRTNERWGGVVATGVRGDLGYDDGTYGVYGYAAMHGITGKNVASNSRFETGG
GAYLHLVNNPNSKLTLGMNLGLMGYDKNLSYYTFGQGGYFSPQSFVSVAFPVDWSGRSDR
LSWRLNASLGVQSFTQKESPYFPTDSRRAGDAGSAAAYAASLGLSSAPFTGMYPKTSKTG
LAYNLAAILEYQLAPKMFLGGSIGLNNAQNYRQLTGGLYIRYVFDGASSLGVPSGTTLRP
LVSPYTPLL
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacccacccgagcggcatgaagccgctgtgtccaccctggctgcgacgcggcccg
ggccgcattcccgcctcgcagtggatggcatgcctcggcctgcttgcagccgtttgcgcg
agcaatcccgcgcgggcacaggcggatgccagcgccgcactcgtcgagcagggcaactac
tggcagacgcagggccgcgcggacctcgcggaagagagctggcgcaagctgctgcgggtc
gatccgcaatcggccgatgccatgtacggcatggcgcaggtcgagctgtcgcgcggcaat
gccgagccggcgcgcagctggatctcgcggctgcgcgccgcgcacccgaacgacagccgc
ctcgcgcgcctgcagcagcaggcccagcaacccggccagggcagcacgctgcaacgcgca
cgcgcggcggcgcgcgcgggccgcggcgcggaagcggtcgagctctatcgcagccagttc
gacaaccgcccgccgcccgaggccctggcgctggagtactaccaggtgctgagcagcacg
ccgcaaggtgccgacgaagcgcgcaagggcatcgagcagctggtgaaggaccatccggac
aacgccaactacaagctcgcgctcgcgcaactgcgcacctacagcgaatcgacgcggcgc
gaaggcatccgcagcctggtcgagttggccaggcaacccaccgtgggcacggccgcgcgc
acgagctggcgccaggcgctcatctggctcgatgcgcgcgcgcccgacattccgctctac
caggactacctggcaagcaacccgaacgacgccgcggtgtcggcgcgcctggagacgctg
acctccggcaagaccgcggccgccgcctcgcccggcgtgccgctcggcgaaggattccgg
gcgctggaccgcggcgacccggccaccgcagagcagcgcttccagcaggcgctgcgcacc
aaggccgacgatcccgaggcgctcggcggcctcggcctggtgcggctgcgccaggaacgt
ttcggcgaagcgcaggaactgctggaacgtgccgcgcgcggctccggcggcagcaaatgg
aattcggcgctgcagagcgccacctactggagcctggtcggccaggcccgcgcggcgcgc
gagaagaacgacgcgcgcggcgcgcagtcgctgctcgaacgcgcggtgcgcatcgatccg
cgcgagagcgtcggacaggtcgcgctggcggacctgcgcgccgccgccggcgagctgccg
caggccgaacagggctacaagcgcgtgctcgaaagcaagccctcggacacccaggccttg
cgcggcctcatcgccgtgtacggtcgccagggccgcgccgacgaagcgctcgcgctggcc
cggcagctcacgcccgaacaggccagccagctcagcggactgcgcgacatccaggtcgag
caggcgcgcgccaaggcccgccagcaggccgatgcgggcgatgcgcccggcgcgcagcgc
acgctcgaggatgcgatgctcgccgcgcccgacagcccgtgggtgcggctcgaccttgcc
aacatctaccgccgccagggcctggtggccgaggcgcgcggcgtgatggagggcctcctg
atgtcgcagcccgacatgcccgatgcgctttatgcaagcgccctgctcgcctccgagagc
ggcgacgcggccggcggcatccagtacctggagcgcattcccgcagcctcgcggacgcgc
gacatggcggcgctgcagcgcaggctctgggcgcaatcgcaggcgcagcgcgcgcaggcg
cttgcccgccagggccaggtggacgcggcacgacaggtgctcggccaggccgaggcggcg
ctcagcagcgacatgccggccgaactctggggccaactggccggcgcgtatgcggagatc
ggcgatgcgccccgcgcgctcgccatgagccggcagctgctcgcgcgcagccccaacccg
ggcatcggcgaccggctgctctatgcgtcggtgctgctcaagaccaagcaggacgtggag
ctctcggcggtgctgcggcagctgcagcccgcgggcatgacagccgcgcagcgcagcgac
ttcgacagcctgcgcatcgccttcgcgctgcgccagaccgatgcgctgcgcgaggccggc
aacctcgaggccgcctacaacgccatggcgccggtgctggccgagcggccggacgatccg
cgggcaatggcggcgctcgcgcggctctactccgccgcgcgcgacgaaacccaggcgctc
gcgctctaccagcgcgtgctgcaacgcagccccaccgacctggacgccctgctcgccgcg
gccgccagcgccagcgcgctgcgccagcacagcgaggccgagaactacgtgatggccgcg
ctgaagcaggcgcccgaccagtcgcgcgtgctggccgccgccggccgcgtctaccggaat
gccggcgacagccgcaaggcggagcagtacctgcgcgccgcggtagacgccgacagccgc
gtcgcgactgggttcgcgcccggcgttgcgccgggagggctgcccgcggcgaatccgttc
gcgggcatgacgggcggtgccccgggcacggccgcgcccggcgcttaccccagcgcggcc
ggcaatccttttgcgcaggcgcgcatgcagccggtggtctatgcggctgcaccggcctat
gcaccggcctaccccgcggcgccgcccgcgtatccggcctatcccgccgcccccgcgaac
acgggctatcccgtcgcgggcgcggcgccaggcgcgcttccctgggcctccggtccggca
ccggctccggctgcgaacagcaagggccggcgcacggcgacggccacggcttcgtcgcgc
aacgccgccgcccgcaacacgccgcaggcttcggcctatatcgcgccgccggcaacgcag
caataccccgttgccggcatgcagccggtcgcgccggtctatgcgcaggcgccgcagccc
gggagctatccgcaggcgtatccgcccgcctacccgtacccccaggcgggcgccgccccg
ctgccggttcccggtgcaggcaacaccggctggaacgcgccgctgcgcgccgcggcgccc
gcagatccggtggccgccgaactgcgcgagctgcaggcgcagcgctccatcagcctgacc
gccggcaccgtctatcgcaatcgcgccggcgaagccgggctcagccagctctcggacttc
cagattcccatcgaggcgcggttcccggtcggcgaaggcaagatcgtcgtgggcgtcacg
ccgacggtgctcgatgccggaacgccctccgccgactaccccaccggcagccgcttcggc
ggcggcccgggcgcggcgatcaccggcctgcagaacggcaccagcgccggccagcagaac
gcctccggcgtcgggctgagcgtgggctacgaaggcaagaacttcggcgcgagcatcggc
accacgccgctcgggtttcccgagaccaacgtggtgggcaacgtgtcgtacgcgggctcg
ttcggcgactcgtggaacgcgaaggtcgatgtgtcccgccgcgcggtcaccgacagcctg
ctgtcgttcgccggcgccaaggaccagcgcaccaacgagcgctggggcggcgtggtcgcc
accggcgtgcgcggcgacctgggctacgacgacggcacctacggcgtctacggctatgcc
gcgatgcacggcatcaccggcaagaacgtcgcgagcaacagccgcttcgagaccggcggc
ggcgcctacctgcacctggtcaacaacccgaactccaagctcacgctgggcatgaacctc
gggctcatgggctacgacaagaacctgagctactacaccttcgggcaaggcggctacttc
agcccgcagagcttcgtgagcgtggccttcccggtggactggagcggacgcagcgaccgc
ctgtcgtggcgcctgaacgcctcgctgggcgtgcagtcgttcacccagaaggagtcgccc
tacttcccgaccgacagccggcgcgcgggcgatgcgggaagcgcggccgcctatgccgcc
tcgctggggctgagcagtgcgcccttcaccggcatgtacccgaagacctcgaagaccggc
ctggcctacaacctggccgccatcctcgagtaccagcttgccccgaagatgttcctcggt
ggctcgatcgggctgaacaacgcgcagaactaccgccagctcacgggcggcctgtacatc
cgctacgtgttcgacggcgcgagctcgctgggcgtgccgagcggcaccacgctgcgcccg
ctggtctcgccctacacgccgctgctttga
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