Variovorax paradoxus EPS: Varpa_3217
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Entry
Varpa_3217 CDS
T01392
Name
(GenBank) polar amino acid ABC transporter, inner membrane subunit
KO
K09971
general L-amino acid transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3217
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
General L-amino acid transporter
Varpa_3217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU37403
UniProt:
E6VA19
LinkDB
All DBs
Position
complement(3465733..3466791)
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AA seq
352 aa
AA seq
DB search
MRNVAQGPIAWRSELWGSPLRALATVLLIAVLAWIGFHIFEWAVVHAVFRADAEACRAVQ
HGACWGVVAEKWRPMLFGRFPYEEQWRPAIAVVVLSAVTVLSAWPRSWRWWLVPLWVVAL
VLFVLLMRGGVMGLSHVPTSRWGGLPLTIGLAVVGLALAFPLALLLALGRRSGWPVVRTL
SASYIELVRGVPLISVLFMASFLLPLLWPAGWQPDVLVRVLAGLTLFVAAYLAEIIRGGL
QAVPRGQTEVAMALGFGRWPVQRDIVLPQALRLVVPALTNSVVGTLKDTSLVTVVGLFEL
TGALGLALGGDPIWRPFYLEGYLFIAAVYWVLCFGLSRYSVWLERRLASAPT
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgttgcgcaaggcccgattgcttggcgcagcgaactctggggttcgccgctg
cgcgcgctggcgacggtgttgctgatcgcggtgctcgcgtggatcggttttcatatcttc
gaatgggccgtggtgcatgcggtgtttcgcgccgatgccgaggcctgccgcgcggtgcag
catggcgcctgctggggcgtggtggccgagaaatggcggccgatgctgttcggccgcttc
ccttacgaagagcaatggcgccccgccatcgcagtggtcgtgctctccgccgtcaccgtg
ctgagtgcgtggccgcgcagctggcgctggtggctggtgccgctgtgggtcgtggcgctg
gtgctgttcgtgttgctgatgcgcggcggcgtcatggggctgagccatgtgccgaccagc
cgctggggcggcctgccgctcaccatcgggttggcggtggtcggactggcgctggccttt
ccgctcgcgctgctgctcgcgctgggccgtcgttcgggctggccggtggtccgcacgctg
agcgcgagctacatcgagctggtgcgcggcgtgccgctgatctctgtgctgttcatggcc
tcgttcctgctgccgctgctgtggccggcgggctggcagcccgacgtgctggtgcgcgtg
ctcgcgggcctcacgctgttcgtcgctgcctacctggccgagatcatcaggggcggcctg
caggccgtgccgcgcggacagaccgaggtggcgatggcgctgggcttcgggcgctggccg
gtgcagcgcgacatcgtgctgccgcaggcgctgcgcctcgtcgtgccggcgctgaccaac
agcgtcgtcggcacgctgaaggacacctcactcgtcaccgtcgtgggcctcttcgagctg
accggcgcgctgggccttgcgctcggcggcgatccgatctggcggccgttctacctcgag
ggctatctcttcatcgccgccgtgtactgggtgctgtgcttcgggctctcgcgctacagc
gtgtggctggagcgcaggctggcgagcgcgccgacctga
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