Variovorax paradoxus EPS: Varpa_3218
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Entry
Varpa_3218 CDS
T01392
Name
(GenBank) polar amino acid ABC transporter, inner membrane subunit
KO
K09970
general L-amino acid transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3218
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
General L-amino acid transporter
Varpa_3218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU37404
UniProt:
E6VA20
LinkDB
All DBs
Position
complement(3466788..3467786)
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AA seq
332 aa
AA seq
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MSRGASRRGAWLAWTVQALLVLAVVAGAFWVVHHALDVLRARGVRSGFDFLTEPAGFSIS
EGWLDFDASQPFWRAFLAGLVNTVRAAVPAAIFSVVLGTLIGIGRLAPHVLMRGICTAYV
ELLRNVPLLVQLLMLAFAMANLLPDPTEPVRLLPGVWLSKGGLSVPWPVAGEGGWWPTHF
EWPERGDFGVSGGAALSPEYVTIVAGLSFYSAAFVAEIVRAGILSVSQGQVLAGQALGLS
SVQQLRIVILPQALRVIVPSLTNQLLSLVKNSSLAVAVGYPELVSVANTTIGSNGRAFEC
IAIIMAVYLLLSLVISFGMNRYNARVALRGWR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccggggggcctcgcgccgcggcgcctggctggcctggaccgtccaggcgctgctg
gtgctggccgtcgtggccggcgccttctgggtggtgcatcacgcgctcgacgtgctgcgc
gcacgcggcgttcgatccggcttcgactttctcaccgagcccgcgggcttctcgatcagc
gagggctggctcgatttcgacgccagccagccgttctggcgcgcttttctcgcgggcctc
gtcaacacggtgcgggcggcggtgccggcagcgattttctcggtcgtcctcggcacgctc
atcggcatcggccggctcgcgccgcacgtgctgatgcgcggcatctgcaccgcctacgtc
gaactgctgcgcaacgtgccgctgctggtgcaattgctgatgctggccttcgcgatggcg
aacctgctgcctgatccgaccgaacccgtgcggctgctgccgggcgtgtggctcagcaaa
ggcgggctcagcgtgccctggcccgtggcgggcgagggcggctggtggccgacgcatttc
gaatggcccgagcgcggcgatttcggcgtgagcggcggcgcagcgctgagccccgagtac
gtgaccatcgtcgcgggcctgtcgttctattcggccgcgttcgtcgcggagatcgtgcgg
gccggcatcctctcggtctcgcaggggcaggtgctggcggggcaggcactggggttgtcg
tcggtgcagcaactgcgcatcgtgatcctgccgcaggcgctgagggtgatcgtgccctcg
ctcaccaaccagttgctcagcctcgtcaagaattcgtcgctcgcggtggccgtgggctat
ccggagctggtgtcggtcgccaacaccaccatcggctcgaacggccgagccttcgagtgc
atcgcgatcatcatggcggtgtacctgctgctgtcgctcgtgatttccttcggcatgaac
cgctacaacgcgcgcgtcgcattgcgggggtggcgatga
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