Variovorax paradoxus EPS: Varpa_3225
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Entry
Varpa_3225 CDS
T01392
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpe03036
]
Varpa_3225
Chromosome and associated proteins [BR:
vpe03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Varpa_3225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
ABC_tran
AAA_29
DUF6444
YbbR
Motif
Other DBs
NCBI-ProteinID:
ADU37411
UniProt:
E6VA27
LinkDB
All DBs
Position
complement(3473732..3477247)
Genome browser
AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES
MQDVIFNGTTTRKQASRSSVELVFDNADHRAGGQWNQFGEIAVRRVLTRDGTSSYYINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET
ENRLGDTRENLTRVEDILRELNANLEKLEKQAEVAARYNTLQGEATKKQHQLWFLKRSES
DADQAKIKSDSERAINDLESRTADLRHIEAELETVRQAHYAAGDQVNQAQGKLYEASAEV
GRLEGEIRFVVEGRQRVEQRLVQLREQMGQWGTRREEAEAEIETLAGRGVDAEEQAILLA
AQLEEHDARMPELEEAVQRAQNEANSQRTTVSQVQQQIQVLAADQRNIEDQSRQLTLRSE
RLRADQNALAAPDEARLLDMQEQLAVAQETASEAEARLHELQEAVPQLDDDRRAKQQAVN
TEGARHAEFSARLEALRALQEKVKTDGKLAPWLAKHGLDGLQGLWSRIHIEQGWESALEA
ALRERLGALEVSRLDMVRAFGNDAPPAKLAFYSPPSAGAPQGVATLPRLSSLLRLNDAGQ
QALLNDWLHGCYTASSFEEALAQRATLQPGEVIYVQSGHAVSSHSVNFYAPDSEQAGLLA
RQQEMENLERQLRAQTLINEEARTALIRAEAAYGDAAQRLVTARREAADTQSRAHELQVE
TLRMTQLAEQTRARSQQLASDLGEVDAQLEELQEKRIAAEGRFEELDMQLADSQERHAQL
DERVIEAGRALNASREQHRSLERQAQEATFSQRTLEARRAELNRAIETASQQVVALTDED
ERARAELSRLSDAAAQAGLQDALSLKLERETSLGAARSQYDDLTLKLRASDERRLQLERE
LDPLRQRITEFQLKEQAARLGVEQYQQLLEDAGADLEAIAQSIETDKVRLTGLQSEIDRL
NREVVALGAVNLAALDELAIASERKTFLDAQSADLNEAIGTLEDAIRKIDAETRDLLGGT
FKIVNEHFSRMFPELFGGGNARLVMTGDEILDAGVQVLAQPPGKKNQTIHLLSGGEKALT
AIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVTAMSRETQFLFISHNKIAMEMA
EQLIGVTMQEQGVSRIVAVDMEAAASMVEAA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcttaattccatcaagctttcgggcttcaagtcgttcgccgaacccaccaacttc
ctgctgccgggccaattggttggcgtggtcgggcccaacggttgcggcaagtcgaacatc
atggatgcggtgcgctgggtgctcggcgaatcgcgcgcctccgaactgcgcggcgagtcg
atgcaggacgtgatcttcaacggcacgaccacccgcaagcaggccagccgctcgagcgtc
gagctggtgttcgacaacgccgaccaccgcgccggcggccagtggaaccagttcggcgaa
atcgcggtgcggcgcgtgctcacgcgcgacggcaccagcagctactacatcaacaaccag
ccggtgcgccgccgcgacgtgcaggacgtgttcctcggcaccggcctcggcccgcgcgcc
tatgccatcatcggccagggcacgatcagccggatcatcgaatccaagcccgaggaactg
cgtctgttcctcgaggaagcagccggcgtctccaagtacaaggagcgtcgccgcgagacc
gaaaaccgcctgggcgacacgcgcgagaacttgacgcgcgtcgaagacatcctgcgcgag
ctcaatgccaacctcgagaagctcgagaagcaggccgaggtggctgcgcggtacaacacg
ctgcagggcgaagccacgaagaagcagcaccagctgtggttcttgaagcgcagcgagagc
gatgccgaccaggccaagatcaagtccgattccgagcgcgcgatcaacgacctcgaatcg
cgcaccgccgatttgcgccacatcgaagccgaactcgagaccgtgcgccaggcccattac
gcggccggcgaccaggtcaaccaggcgcagggcaagctctacgaggccagtgccgaagtc
ggccggctcgaaggcgaaattcgcttcgttgtcgaaggccgccagcgcgtcgagcagcgg
ctcgtgcagctgcgcgagcagatgggccagtggggcacgcgccgtgaagaagccgaagca
gagatcgagacgctggccgggaggggcgtcgatgccgaagagcaagccatccttttggcc
gcacagctcgaagaacacgacgcgcgcatgcccgagctcgaagaagccgtgcagcgcgcc
cagaacgaagccaacagccagcgcacgaccgtgtcgcaggtgcagcagcagatccaggtt
ctggccgccgaccagcgcaacatcgaagaccagagccgacagctcacgctgcgcagcgag
cgcctgcgcgccgaccagaacgcgctggccgcgcccgacgaggcgcgtctgctcgacatg
caggagcagctcgccgtcgcgcaggaaaccgctagcgaagccgaggcccgcctgcacgag
ctgcaggaagccgtgccgcaactggacgacgaccgccgcgcgaagcagcaggccgtcaac
accgaaggcgcgcgccacgccgagttctcggcgcggctcgaagcgctgcgtgcgctgcag
gaaaaggtcaagaccgacggcaagctggccccctggctcgccaagcatggcctcgacggc
ctgcagggcctgtggagccgcattcacatcgagcagggctgggaaagcgcgctcgaagcc
gcattgcgcgagcgcctgggcgcgctcgaagtcagccggctcgacatggtccgcgccttc
ggcaatgacgcgccgccggccaagctggcgttctacagcccgccatcggccggtgcgcct
cagggcgtggcgacgctgccgcggctgtctagccttctgcggctgaacgatgccggccag
caagccttgctgaacgactggctccacggctgctacaccgcctccagctttgaagaagca
ctggcgcagcgcgccacgctgcagccgggcgaagtcatctacgtgcagagcggccatgcc
gtgtcctcgcacagcgtcaacttctacgcgcccgactctgagcaggccggcctcctggcc
cgccagcaggaaatggaaaacctggagcgccagctccgcgctcagaccctcatcaacgaa
gaggcgcgcactgcgctgattcgcgccgaagccgcctacggcgacgcagcgcaacgcctc
gtgaccgcacgccgcgaagccgccgacacccagtcgcgcgcccacgaattgcaggtcgaa
accctgcgcatgacccagctcgccgagcaaacgcgtgcgcgcagccagcagttggcctcc
gacctcggcgaagtcgatgcgcaactcgaagaactgcaagagaagcgcatcgccgccgaa
ggccgcttcgaagagctcgacatgcaactggccgacagccaggagcgccacgcccagctc
gacgagcgcgtcatcgaagccggccgtgcgctgaatgccagccgcgagcagcaccgcagc
ctggagcggcaggcgcaggaagccaccttctcgcagcgcacgctcgaagcccgtcgtgca
gagttgaaccgcgcgatcgagaccgcatcgcagcaggtcgtggcgctcaccgacgaagac
gagcgcgcccgcgccgagctgagccggctctccgacgccgctgcgcaggccggcctgcag
gacgcgctgtccctcaagctcgaacgcgaaacctcgctcggtgcagcccgcagccagtac
gacgacctcacgctcaagctgcgcgccagcgacgagcgccgcctgcagttggagcgcgaa
ctcgatccgctgcgccagcgcatcaccgaattccagttgaaggagcaggccgcgcgcctg
ggtgtcgagcaataccagcagttgctggaagatgccggcgccgatctcgaagccattgcg
caatccatcgagaccgacaaggtgcgcctgaccggacttcagagcgaaatcgaccgtctc
aaccgcgaagtggtcgcactcggcgcggtgaacctcgccgcgcttgacgaactcgcgatt
gccagcgagcgcaagaccttcctcgatgcccagtcggccgacctgaacgaagccatcggc
acgctcgaagacgcgatccgcaagatcgacgccgaaacgcgcgacctgctcggcggcacc
ttcaagatcgtcaacgagcacttcagccgcatgttccccgagctcttcggcggcggcaat
gcgcggctggtgatgacgggcgacgaaatcctcgacgccggcgtgcaggtgctcgcgcag
ccgcccggcaagaagaaccagaccatccacctgctctcgggcggcgagaaggcgctcacg
gccattgcgctcgtgttcgcgatcttccagctcaacccggcaccgttctgcctgctggac
gaagtggacgcgccgctggacgacgccaacaccgaacgctatgccaaactcgtgaccgcc
atgagccgcgaaacccagttcctcttcatcagccacaacaagatcgccatggaaatggcc
gagcagttgatcggcgtcacgatgcaggagcagggcgtttcgcgcatcgtcgcggtggac
atggaggccgcggcctccatggtcgaggccgcttga
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