Variovorax paradoxus EPS: Varpa_3288
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Entry
Varpa_3288 CDS
T01392
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00540
Lipopolysaccharide biosynthesis
vpe01100
Metabolic pathways
vpe01250
Biosynthesis of nucleotide sugars
Module
vpe_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Varpa_3288
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpe01005
]
Varpa_3288
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Varpa_3288
Lipopolysaccharide biosynthesis proteins [BR:
vpe01005
]
Lipid A
Varpa_3288
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
RTX
Motif
Other DBs
NCBI-ProteinID:
ADU37473
UniProt:
E6VB24
LinkDB
All DBs
Position
3539845..3540630
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AA seq
261 aa
AA seq
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MTGSVRFTVLVPARLASTRLPNKPLADIAGLPMVVRVAQRASQSGASRVVVAGDDASIVS
ACKAHGVEAILTRQDHPSGTDRLAEACEQLGLDGDEIVVNVQGDEPLIDPELIDAVAAAL
ALHPEAAMSTAAHEIDSISDFMNPNVVKAVLDAQGNALYFSRAPIPWWRDGSAGGAAPTA
LPLPAPLRHIGIYGYRAGFVRKFPSLPPAPVEATEALEQLRALWHGHRIAVHVSHVAPGP
GIDTPEDLARVRAVFAAGSAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggctccgtgcgcttcaccgtcttggtgccggcacgcctcgcctccacgcggctg
cccaacaaaccactggccgatatcgcgggtctgccgatggtggtgcgtgtcgcgcaacgc
gcgagccagtccggcgcatcgcgcgttgttgtggccggagacgatgcgtccatcgtttcg
gcctgcaaggcgcacggcgtcgaagccatcctcactcgccaggaccatccgagcggcacc
gaccggctggctgaagcgtgcgagcaactgggcctcgatggcgacgagatcgtcgtcaac
gtacaaggcgacgagccgctcatcgaccccgagctgatcgatgccgtggcggcggcgctg
gcccttcatcccgaggccgcgatgagtaccgcggcccacgagatcgactcgatcagcgac
ttcatgaacccgaacgtggtgaaagcggtgcttgacgcccaaggcaacgcgctttacttc
agccgcgcgccgattccctggtggcgcgacggttctgccggcggggctgccccgaccgcg
ctgcctttgcctgcgccgctgcgccacatcggcatctatggctatcgcgccggcttcgtg
cggaaatttccgtcgctgccgccagcgccggtcgaagccaccgaagcactcgagcaattg
cgcgctctctggcatgggcatcgcatcgcggtgcatgtgagccatgtcgcgcccgggccg
ggcatcgacacccctgaggatctggcgcgcgtgcgtgccgtctttgctgccgggtccgcc
tcctaa
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