KEGG   Variovorax paradoxus EPS: Varpa_3291
Entry
Varpa_3291        CDS       T01392                                 
Name
(GenBank) transcriptional repressor, LexA family
  KO
K01356  repressor LexA [EC:3.4.21.88]
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vpe01002]
    Varpa_3291
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpe03400]
    Varpa_3291
Enzymes [BR:vpe01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.88  repressor LexA
     Varpa_3291
Peptidases and inhibitors [BR:vpe01002]
 Serine peptidases
  Family S24: LexA family
   Varpa_3291
DNA repair and recombination proteins [BR:vpe03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Varpa_3291
SSDB
Motif
Pfam: Peptidase_S24 LexA_DNA_bind HTH_20 Sigma70_r4 HTH_Crp_2 Rrf2 LTXXQ
Other DBs
NCBI-ProteinID: ADU37476
UniProt: E6VB27
LinkDB
Position
3542477..3543160
AA seq 227 aa
MQFAVKLTARQQQILDLIQSAIARTGAPPTRAEIANELGFKSANAAEEHLQALARKGVIE
LVSGTSRGIRLKGDALRSLNETRHREGGQFSLSLPGMAQLALPLIGRVAAGSPILAQEHV
DQTYYVENTLFQRQPDYLLKVRGMSMRDAGIMDGDLLAVQATKEARNGQIVVARLGDEVT
VKRLKRNKQVIELHAENPDYPTIIVQPGEPFEIEGLAVGLIRNTMLM
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcagttcgccgtgaagcttaccgcccgccagcagcagatcctcgacttgatccagagc
gccattgcgcgcactggcgccccgcccacacgcgccgaaatcgccaatgagctggggttc
aagtcggccaacgccgccgaagagcacctgcaggcgctggcccgcaagggcgtgatcgaa
cttgtcagcggcacctcgcgcggcattcgactcaagggcgacgcgctgcgttcgctcaac
gaaacgcgccatcgcgaaggcgggcagttctcgctctcgctgcccggcatggcgcagctg
gcgctgccgctcatcggccgtgttgcggcaggctcgcccatcctggcgcaagagcatgtc
gaccagacctactacgtcgagaacacgctgttccagcgccagcccgattacctgctcaag
gtgcgcggcatgtcgatgcgcgacgccggcatcatggacggcgacctgctcgccgttcag
gccaccaaggaagcgcgcaatggccagatcgtggtcgcgcgcctgggcgacgaagtcacc
gtcaagcgcctgaagcgcaacaagcaggtgatcgagttgcacgccgagaaccccgactac
ccgaccatcatcgtgcagcccggcgaacctttcgaaatcgaaggcctcgcggtcggcctc
atccgcaacaccatgctgatgtag

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