Variovorax paradoxus EPS: Varpa_3297
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Entry
Varpa_3297 CDS
T01392
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_3297
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_3297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_3297
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Varpa_3297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
GntR
HTH_24
HTH_11
TrmB
Motif
Other DBs
NCBI-ProteinID:
ADU37482
UniProt:
E6VB33
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All DBs
Position
3548524..3549243
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AA seq
239 aa
AA seq
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MDDPILTIEEREAINSGRWFSSLSPSLRHDILRCAFVKRYKDGDLIAARGDPPEHWIACA
RGAVRVSSTAVSGKQVTLTYVEPGIWFGDVAMFDGDRRTHDAYAHGDSTILCVARADFQK
ILAAHVELYEALMRLQARRIRTLFGLVEDLNTLPLRARLAKQLIHLVRSYGVPNLDDGSQ
MRIGLQLAQEELAQLLGASRQRVNQELKTMEREGSIRIEPGGLVVLDRAALRRISEADI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccccattcttaccatcgaagaacgtgaagcgatcaacagtggtcgctggttt
tcttccctatctccatcgctacggcacgacatcctccgatgcgctttcgtcaaacgctac
aaggacggcgacctgatcgccgcacgcggcgacccaccagaacactggattgcctgcgcc
aggggcgcggtgcgggtcagctcgacggccgtctcgggcaagcaggtgacactgacctac
gtggagccgggcatctggttcggcgacgtggcgatgttcgacggggaccggcgcacgcac
gacgcctatgcgcatggggacagcaccatcctttgcgtggcgcgagccgacttccagaag
attcttgccgcgcacgtggagttgtacgaagcgctcatgcggctgcaggcgcgccgcatc
cgcacgctgttcgggctggtggaagacctcaacaccctgcccttgcgcgcacgccttgcc
aagcaactgattcacctcgtgcgcagctacggcgtgcccaacctggacgatggcagccag
atgcgcatcggcctgcaactggcgcaggaagagctggcgcaactgctcggtgcatcgcgc
cagcgcgtgaaccaggaactcaagaccatggaacgcgagggcagcatccggatcgagccg
ggcggcctggtggtcctcgaccgtgcggcgctgcggcgcatttccgaagcggatatctga
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