Variovorax paradoxus EPS: Varpa_3299
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Entry
Varpa_3299 CDS
T01392
Name
(GenBank) acyl-CoA dehydrogenase domain-containing protein
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00071
Fatty acid degradation
vpe00280
Valine, leucine and isoleucine degradation
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01212
Fatty acid metabolism
Module
vpe_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
Varpa_3299
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Varpa_3299
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
Varpa_3299
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
HpaB_N
Motif
Other DBs
NCBI-ProteinID:
ADU37484
UniProt:
E6VB35
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All DBs
Position
3550386..3551657
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AA seq
423 aa
AA seq
DB search
MDFEYSAKTKELQKRVKAFMDENIYPAEAEYSAELAANTAAGKRWTALKTVEKVKEKAKA
QGLWNLFLPVDSASASGYAGAGLTNQEYAPLAEIMGAVPWASEAFNCSAPDTGNMETIAR
YGSEEIKARWLKPLLEGQIRSAFAMTEPDVASSDATNISTRIERQGDEYVINGHKWWISG
AADPRCAVFITMGKSDPDAPRHSQQSMVIVPADAKGIRIVRPLNVMGYDDAPHGHVEMYF
ENVRVPVDNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCKRASSRVAFGKT
VASQTVTQERIAEARCKIDMARLLTLKAAWLMDVAGNKVAKNEIAMIKVVAPSMACQVID
WAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNAIAKWELGKYAPSKTDAEAPV
TRF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgaatattcggccaagaccaaggaactgcagaagcgcgtcaaggcgttcatg
gatgaaaacatctacccggcagaggccgagtacagcgccgagctggctgcgaacacggcg
gccggcaagcgctggaccgcattgaagacggtggaaaaggtcaaggaaaaagccaaggcc
cagggcctgtggaacctcttccttccggtcgacagcgcctcggcctccggctacgcaggt
gccggcctcacgaaccaggaatacgcgccgctggccgaaatcatgggtgcggtgccttgg
gcaagcgaagccttcaactgctcggcgcctgacaccggcaacatggaaaccatcgcccgc
tacggctcggaagagatcaaggcgcgctggctcaagccgctgctcgaaggtcagatccgc
tcggccttcgcgatgaccgagcccgacgtggcatcgagcgacgccaccaacatctcgacc
cgcatcgaacgccagggcgacgagtacgtgatcaacggccacaagtggtggatttcgggc
gcggccgatccgcgctgcgccgtcttcatcaccatgggcaagagcgatccggacgcaccg
cgccactcgcagcagagcatggtgatcgtgccggccgatgccaagggcatccgcatcgtg
cgcccgctcaacgtgatgggttacgacgacgcgccgcacggccacgtcgagatgtatttc
gagaacgtgcgcgtgcctgtcgacaacatcctgcttggcgaaggccgcggtttcgaaatc
gcccaaggccgccttggcccgggacgcatccaccactgcatgcgcctgatcggcttggcc
gagcgcgcgctcgagctgatgtgcaagcgcgcctcctcgcgcgtcgccttcggcaagacc
gtcgcgtcgcagaccgtgacgcaggaacgcatcgccgaagcgcgctgcaagatcgacatg
gcccgcctgctcacgctgaaggccgcatggctcatggacgtggcgggcaacaaggtcgcc
aagaacgagatcgcgatgatcaaggtggtcgcgccgagcatggcctgccaggtgatcgac
tgggccatgcaggtccacggcggcggcggcatgtgcgacgacttccccctcgcctacgcc
tatgccggcgcgcgcacgctgcgctttgcggacggcccggacgaagtgcaccgcaatgcg
atcgcgaagtgggaactgggcaagtacgcgcccagcaagaccgacgccgaggcgcccgtc
acgcgcttctga
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