Variovorax paradoxus EPS: Varpa_3316
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Entry
Varpa_3316 CDS
T01392
Name
(GenBank) beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
KO
K02372
3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
4.2.1.59
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00061
Fatty acid biosynthesis
vpe00780
Biotin metabolism
vpe01100
Metabolic pathways
vpe01212
Fatty acid metabolism
vpe01240
Biosynthesis of cofactors
Module
vpe_M00083
Fatty acid biosynthesis, elongation
vpe_M00572
Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Varpa_3316
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Varpa_3316
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpe01004
]
Varpa_3316
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
Varpa_3316
Lipid biosynthesis proteins [BR:
vpe01004
]
Fatty acid synthase
Component type
Varpa_3316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FabA
ApeI-like
ApeP-like
4HBT
MaoC_dehydratas
AfsA
SAF
Motif
Other DBs
NCBI-ProteinID:
ADU37501
UniProt:
E6VB52
LinkDB
All DBs
Position
complement(3568500..3568949)
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AA seq
149 aa
AA seq
DB search
MTTTLDIHQILKLLPHRYPFLLVDRVLDMEKGKRITALKNVTMNEPFFNGHFPHRPVMPG
VLMLEAMAQAAALLSFHSLDIVPDDNTVYYFAAIDGARFKRPVEPGDQLTLEVEIERMKA
GISKFKGRALVGSELACEATLMCAMRQIS
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgctcgatatccatcaaatcctcaagctgcttccccaccgctacccgttc
ctgctggtggaccgcgtgctggacatggaaaagggcaagcgcatcacggcgctcaagaac
gtgacgatgaatgagccattcttcaacggccacttcccgcaccgtccggtgatgccgggc
gtgctgatgctcgaagccatggcgcaggccgcggcgctcttgtcgttccattcgctcgac
atcgtgccggacgacaacaccgtctactactttgcagccatcgacggcgcgcgcttcaag
cgtcccgtggagccgggcgaccagctcacgctcgaagtcgagatcgagcgcatgaaggct
ggcatctccaagttcaagggccgcgcattggtgggcagcgagctcgcctgcgaagccacg
ctgatgtgcgccatgcgccagatcagctga
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