Variovorax paradoxus EPS: Varpa_3342
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Entry
Varpa_3342 CDS
T01392
Name
(GenBank) 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00900
Terpenoid backbone biosynthesis
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Varpa_3342
Enzymes [BR:
vpe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Varpa_3342
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Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
ADU37527
UniProt:
E6UV15
LinkDB
All DBs
Position
complement(3599045..3599539)
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AA seq
164 aa
AA seq
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MTSSAPFNIRVGEGWDVHQLVAGRKLILGGIEVPHTTGLLGHSDADVLLHAITDALLGGA
GLGDIGRHFPDTDVQFRGADSAVLLAEAARRVRAAGWEIGNVDSTVIAQAPKLAPHIPLM
CQRIADTLGIALDQVNVKAKTAEKLGPVGEGRAMEARAAVLLHR
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatctgcacccttcaacattcgcgtcggcgagggctgggacgttcaccagctc
gtggcggggcgcaagctcatcctgggcggcatcgaggtaccgcatacgaccggcctgctg
gggcattcggacgcagacgtgctgctgcacgcgatcaccgatgcgctgctcggcggtgcc
ggactcggtgatatcggccggcactttcccgacaccgacgtgcagttccgcggggccgat
tcagcggtgctgctggccgaagcggcacgccgcgtgcgggccgccggctgggagatcggc
aacgtcgacagcaccgtgatcgcgcaggcgccgaagctggcgccgcacattccgctcatg
tgccagcgcatcgcggacaccctgggcatcgcgctagatcaggtcaacgtgaaggccaag
acggccgagaagctcggcccggtgggcgagggccgcgcgatggaagcgcgcgcggccgtt
ctgctccaccgctga
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