Variovorax paradoxus EPS: Varpa_3350
Help
Entry
Varpa_3350 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3350
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_3350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ADU37535
UniProt:
E6UV23
LinkDB
All DBs
Position
3607792..3610194
Genome browser
AA seq
800 aa
AA seq
DB search
MPSRTSLPRGASRHLIAVAVLGCIAQAGQSAMAQDTAATRPPQATSTAAGAGAVIGFSIP
AQPLDQALNQLARQANLQLLAPSALLNGLRSRAIRADLSVGAATSQLLQGTGLTARMTGN
MLVIERATQTSDTTLPAVTVNASAERETAIGPVPGYVARRSQTATKTDTPLLEVPQSISV
IGREEMDARGVQDIMEAVRYTPGVTVNNWGFDPRGIEWILMRGFDTTTGIAGYRDGLVLP
AYSVTEPYGVERVEVLRGPSSVTFGQGDAGGIINRVSKMPSNTPVNEVEVRYGNFQRKQL
ALDLGGVAGDTLSYRLLGVGLDTNSQMHYGDGTPFSNKRTYLAPSLRWQPSADTSFTLLG
EFLDNKASDDVFYVMDNAGRNTGIVRGDPKFSRIRNRQESLGYLFEHHVNDNWTVRHNLR
YSNARIDKHILRDALLPDDYTLTRSARSFPEWYGQWSSDAQLQGRVRTGIVEHTLLFGFD
ATRIRYTSKEFSGPAPSLDLRYPVNLLPIPEPLVPASNYTQITQQLGIYAQDQIKIDDRW
VLTLSGRQDRVKSETTDRINSTRKGQADNKFSGRAGLSYLVGNGWAPYVSYATSFMPTSG
VDLNGNPLQPTRGKQVEAGIKYQPEGSRTSFTAAVFDLRKSNVVTYDQNTFESRQIGRIR
SRGLELEAKAELARNLNLTASYTVLNMKVLESANTSEVGKMPIQVPKQSASLWLDYTLGN
GIGFGGGVRYIGRRWNDVTNTSDEGGVALLDATVHYKTGPWRFALSATNLANRKYTASRA
YNNYYSGNERTLVASAKYQF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcgcacctcccttccacgcggcgcctcgcgccacctgatcgccgtcgccgtc
ctgggctgcatcgcccaggccggccagagcgcgatggcacaagacacggcagcgacgcgg
cccccgcaagccacgtcgactgcggcgggcgcaggtgcggtcatcggcttctccatcccc
gcccagccgctggaccaggcgctgaaccaactggcccgccaggccaacctgcagttgctg
gcgccgtcggccttgctgaacggccttcgcagccgggcgatacgggccgacctgagcgtc
ggcgcggccacctcgcaactgctgcaaggcacgggattgaccgctcggatgaccggcaac
atgctggtcatcgaacgggccacgcagacctccgacaccacgctgccggccgttacggtc
aacgcctcggcagagcgcgaaaccgccatcggtccggtgcccggctatgtggcgcggcgc
agccagaccgccaccaagaccgacacgccgctgctcgaagtgccgcagtcgatctcggtc
atcgggcgggaagaaatggacgcacgcggcgtgcaggacatcatggaagctgtgcgctac
acgcccggtgtcacggtcaacaactggggcttcgacccccggggcatcgaatggatcctg
atgcgcggcttcgacacgacaaccggcattgccggctaccgcgacggcctcgtcctgccc
gcctattccgtgaccgagccctacggcgtcgagcgcgtcgaagtgctgcgcggaccgtcc
tcggtgaccttcggccagggtgatgccggcggcatcatcaaccgtgtgagcaagatgccg
agcaacacgccagtgaacgaagtcgaggtgaggtacggcaacttccagcgcaagcaactg
gccttggacctgggcggagtcgccggcgacaccctcagctatcgcctgctcggcgtcggt
ctggacaccaactcgcagatgcactacggagatggcacgccgttctcgaacaagcgcacc
tacctggccccttcgttgcgctggcagccctcggccgacacctcgttcacgctgctcggc
gagtttctggacaacaaggccagcgacgacgtcttctatgtcatggacaacgcgggccgc
aacaccggcatcgttcgcggcgacccaaagttcagccgcatccggaaccgccaggaatcg
ctgggctacctgttcgaacaccatgtgaacgacaactggacggtgcgccacaacctgcgt
tactccaacgcccgcatcgacaagcacatcctgcgcgacgccctgctgccggacgactac
acgctcacgcgcagcgcgcgctcctttccggagtggtacggccagtggagttcggacgca
cagttgcagggccgtgttcgcaccggaatcgtcgagcacacgctgctgttcggcttcgac
gcgacccgcatccgctacacgtccaaggagttctcgggaccggcacccagcctggatctg
cgctaccccgtcaacctcctgccaataccagagcccctcgtccccgcgagcaactacacc
cagatcacccagcagttgggcatctacgcccaggaccagatcaagatcgacgatcgctgg
gtgctcacgctcagcggacgccaggatcgcgtgaagtccgagaccaccgaccgcatcaac
agcacccgcaaaggccaggccgacaacaagttcagcggccgtgcgggcctgagctatctg
gtcggcaacggttgggcgccgtatgtcagctatgccacgtccttcatgccgaccagcggc
gtcgacctcaacggcaacccgttgcagccgacccgtggcaagcaggtggaagccggcatc
aagtatcagcccgaggggtcgcgcacgtcgttcaccgctgccgtcttcgacctgcgcaag
tcgaacgtggtcacctatgaccagaacaccttcgagtcccgtcagatcggccgcatccgc
tcgcgtggtctcgaactggaagccaaggccgaactggcgcgcaacctgaacttaactgcc
tcctataccgtgctcaacatgaaggtgttggagagcgccaacacgagcgaggtcggaaag
atgccgatccaggtgcccaagcaatccgcttccctgtggctcgactacaccctggggaac
ggcatcggattcggcggcggtgtgcgctacatcggcagacgctggaacgacgtgaccaac
acctcggacgaaggcggcgttgcgctgttggacgccacggtgcactacaagaccggcccc
tggcgcttcgcactgagcgcaaccaacctggccaaccgcaagtacaccgcctcacgcgcc
tacaacaactactacagcggcaacgagcgcacgctggtcgccagcgcgaagtaccagttc
tag
DBGET
integrated database retrieval system
