Variovorax paradoxus EPS: Varpa_3360
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Entry
Varpa_3360 CDS
T01392
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18902
multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Module
vpe_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3360
01504 Antimicrobial resistance genes [BR:
vpe01504
]
Varpa_3360
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_3360
Antimicrobial resistance genes [BR:
vpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
Varpa_3360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ADU37545
UniProt:
E6UV33
LinkDB
All DBs
Position
complement(3618891..3622178)
Genome browser
AA seq
1095 aa
AA seq
DB search
MNLSKFFIDRPIFAGVLSLLMLIAGLIALRGLPISEYPEVAPPSVVVRAQYPGANPKVIA
ETVATPLEEQINGVEGMLYMGSQATTDGVLTLTVTFRLGTDPDKAQQLVQNRVSQAEPRL
PEEVRRLGITTVKSAPDLTMVVHLVSPNNRYDINYLRNYAVLNVKDPLARIEGVGQVQIF
GGGDYSMRVWLDPQKVAQRGLSASDVVAAIRGQNVQAAAGVVGASPGLSGVDMQLSINAQ
GRLQSEEEFGDIIVKSGTDGAVTRLRDIGRLEMGAADYSLRSLLNNDPAVGMGVFQAPGS
NALDISANVRKTMEELNKNMPEGLEYRIAYDPTQFVRASIESVIHTLLEAIALVVLVVIL
FLQTWRASIIPLLAVPVSVIGTFAVLHVLGFSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIEAGLTPREATYRAMREVSGPIIAIALVLVAVFVPLAFISGLTGQFYRQFAVTIAIST
VISAINSLTLSPALAALLLRGHDQPKDALTRGMDKAFGWLFRGFNKLFHRGSEAYSGGVK
NVISRKALMLAIYVALIAVTFGLFKAVPGGFVPAQDKQYLIGFAQLPDGATLDRTDEVIQ
RMGEIMKKNPNVEDAIAFPGLSINGFTNSSNSGIVFATLKPFDQRKRADQSGGAVAGQLN
GAFSSIQDAFIVMFPPPPVAGLGTTGGFKLQIEDRASVGYDQMDAAVKAFMAKAYATPEL
TGMFTSWQVNVPQLYADIDRTKARQLGVPVTDIFDTMQIYLGSLYANDFNKFGRTYSVRV
QADAPYRARAEDVGLLKVRSTSGEMVPLAALMKVNSTFGPERAMRYNGYLAADINGGPAP
GYSSGQAQDAITKIAAETLPKGVSFEWTELTYQEILAGNSAFLVFPLAILLVFLVLAAQY
ESLTLPIAIILIVPMGIMAAMAGVWISGGDNNVFTQIGLIVLVGLSAKNAILIVEFAREL
EFAGRTPIQAAIEASRLRLRPILMTSLAFVMGVLPLVLSTGAGSEMRKAMGVAVFAGMIG
VTAFGLFLTPVFYVLLRRLAGNKPLKLHGEVPHGEEFVSAGHPAAPAPSSSHGGSGGGGL
HPVPASPRPSHESHD
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctctaaattcttcatcgaccggccgatctttgccggcgtgctgtcgctattg
atgctgatagccggcctgatcgcgctgcgcgggctgccgatctcggaatacccggaagtc
gcgccgccttcggtggtggtgcgcgcccagtacccgggcgccaaccccaaggtgatcgcc
gaaaccgttgcgactccgctcgaagagcagatcaacggcgtcgaaggcatgctctacatg
ggcagccaggcaacgaccgacggcgtgctcacgctgaccgtcacgttccgcctcggcacc
gacccggacaaggcccagcagcttgtgcagaaccgcgtctcgcaagccgaaccgcgcctg
cccgaggaagtgcggcgcctgggcatcacgaccgtcaagagcgcgcccgacctgacgatg
gtggtccacctcgtctcgccgaacaaccgctacgacatcaactacctgcgcaactacgcg
gtgctgaatgtgaaggacccgctcgcgcgcatcgaaggcgtgggccaggtgcagatcttc
ggcggcggcgattactcgatgcgagtctggctcgacccgcagaaggtcgcgcagcgcggc
ctctcggcgagcgacgtggtggctgcgatccgcggccagaacgtgcaggccgcggccggc
gtggtcggcgcatcgccgggcctctcgggcgtggacatgcagctctccatcaatgcgcaa
gggcgcctgcagagcgaagaagaattcggcgacatcatcgtcaagagcggcaccgacggc
gccgtgacgcgcctgcgcgacatcggccgcctcgaaatgggcgctgccgactactcgctg
cgttcgctgctgaacaacgacccggccgtcggcatgggtgtgttccaggctccgggctcc
aacgcgctcgacatctcggccaacgttcgcaagacgatggaagagctcaacaagaacatg
ccggaaggcctggaataccgcatcgcctacgacccgacgcagttcgtgcgtgcgtccatc
gaatcggtgatccacacgctgctcgaagccatcgcgctggtggtgctggtcgtgatcctg
ttcctgcagacgtggcgcgcgtcgatcattccgctcttggccgtgccggtgtcggtgatc
ggtaccttcgcggtgctgcacgtcctcggtttctcgatcaatgcgctgagcctcttcggg
ctggtgctggcgatcggcatcgtggtggacgacgccatcgtggtggtggagaacgtcgag
cggaacatcgaggccgggctcacgccgcgtgaagcgacctaccgggcgatgcgcgaagtg
tccgggcccatcatcgcgatcgcgctggtgctggtggccgtgttcgtgccgctggctttc
atcagcggtctcacgggccagttctatcgccagttcgcggtgaccatcgcgatctcgacg
gtgatctcggcgatcaactcactgacgctgtcgccggctcttgctgcattgctgctgcgc
ggtcacgaccagcccaaagacgcgttgacgcgcggcatggacaaggccttcggctggctc
ttccgcggcttcaacaagctgttccatcgtggttcggaggcctacagcggcggcgtgaag
aacgtcatctctcgcaaggcgctgatgctggcgatctacgtcgcgctgatcgcggtgacc
ttcggtctcttcaaggcggtgcccggcggcttcgtgccggcgcaggacaagcagtacctc
atcggttttgcccaactgcccgacggcgccacgctcgaccgcaccgacgaagtgatccag
cgcatgggcgagatcatgaagaagaacccgaacgtggaagacgccatcgccttcccgggc
ctgtcgatcaacggcttcaccaacagctcgaactcgggcatcgtgttcgccacgctcaag
cccttcgaccagcgcaagcgcgccgaccagagcggcggtgcggtggcgggccagctcaac
ggtgccttctcgagcatccaggacgccttcatcgtgatgttcccgccgcccccggtggcg
ggcctgggcaccacgggcggcttcaagctgcagatcgaagaccgcgcctcggtcggctac
gaccagatggacgccgcggtgaaggccttcatggccaaggcgtacgccacgcccgagctc
acgggcatgttcacgagctggcaggtcaacgtgccgcagctctatgcggacatcgaccgc
accaaggcccgccagctcggcgtgccggtgacggacatcttcgacacgatgcagatctac
ctgggtagcctgtacgccaacgacttcaacaagttcggccgcacgtactccgtgcgcgtc
caggccgatgcgccttaccgcgcccgtgccgaagacgtgggcctcttgaaggtgcgctcg
acttcgggcgagatggtgccgctggccgcgctgatgaaggtcaactcgaccttcggcccg
gaacgcgccatgcgctacaacggctaccttgcggccgacatcaacggcggtccggccccc
ggctattcgtcgggccaggcgcaggacgcgatcaccaagatcgcggccgagacgctgccc
aagggcgtgagcttcgagtggaccgagctgacgtaccaggaaatcctggccggcaactcc
gccttcctggtgttcccgctggccatcctgctggtgttcctggtgctggctgcccagtac
gagagcctgacgttgccgatcgcgatcatcttgatcgtgcccatgggcatcatggccgcg
atggcgggcgtatggatatcggggggtgacaacaacgtcttcacgcagatcgggttgatc
gtgctggtggggctgagtgcgaagaacgcaattttgatcgtggagttcgcacgggagctg
gagttcgccggacgcacgcccatccaggccgcgatcgaagcgagccgcctgcgcctgcgc
cccattctcatgacctcgctggccttcgtgatgggtgtgctgcccctggtgctctcgact
ggcgcgggctcggagatgcgcaaggccatgggcgtggcggtgttcgccggaatgatcggc
gtgacggccttcggcctgttcctgacgccggtgttctatgtgctgctgcgccgcctggcg
ggcaacaagccgctcaagctgcatggcgaagtgccgcatggcgaggagttcgtgtcggcg
ggccatccggccgctccggcaccttcgtcttcgcacggtggttcgggcggtggcgggctg
cacccggtgccggcctcgccgcgtccctcgcacgagtcgcatgactga
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