Variovorax paradoxus EPS: Varpa_3412
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Entry
Varpa_3412 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02001
glycine betaine/proline transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3412
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Varpa_3412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU37597
UniProt:
E6UW25
LinkDB
All DBs
Position
3674643..3675812
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AA seq
389 aa
AA seq
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MNDTTLPSDPNMHDLGAALNTAPEPTAFVDPWEALSAAPDTSATSAWLDAPVNAAHQLAG
QADTATSGFQLHRLWDGTLPVESWINQGLGWVVEHFRPFFQTVRLPIDSTLNWVQGLLTG
LPTLAMIALIGLFAWQFAGRALAIGTTVALLLVAMLGIWPEAMVTLSLVLTSLVFCMVIG
LPLGVLLASSDRAQRVMRPVLDAMQTTPAFVYLVPVVMLFGIGNVPGVIVTIIFALAPLV
RLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIAS
MIAVGGLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRLTQAMGKSRRSAGRRWWHTGP
AGLALRVLQRLVGTPSRDAGAPVPALSTQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaccacattgccttccgacccgaacatgcacgacctgggcgccgcgttgaac
acggccccggagcccaccgccttcgtcgatccgtgggaggcgctctcggccgcgcccgac
acctcggccaccagcgcctggctcgatgcaccggtgaacgccgcgcaccagcttgccgga
caggccgacaccgccaccagcggttttcaactgcaccgcctctgggacggcaccctcccc
gtcgagtcctggatcaaccagggcctcggctgggtggtcgagcatttccgccccttcttc
cagaccgtgcgcctgcccatcgacagcacgctgaactgggtgcagggcctgctgaccggc
ctgccgacgctcgcgatgatcgcgctcatcggcctcttcgcctggcagttcgcaggccgc
gcgctggccatcggtaccacggtggcgctgctgctcgtggcgatgctgggcatctggccc
gaagcgatggtcacgctgtcgctggtgctgacctctctcgtgttctgcatggtcatcggc
ctgccgctcggcgtgctgctggccagcagcgaccgggcccagcgggtcatgcggcccgtg
ctcgatgcgatgcagaccacgcccgccttcgtgtacctcgtgccggtggtgatgctgttc
ggcatcggcaacgtgccgggcgtgatcgtgacgatcatcttcgcgctcgcgccgctggtg
cgcctcaccaacctgggcctgcgccaggtgcggcccgacctgatcgaggccgcgcgggcc
tacggcgcctcgccctggcagatgctggtgaaggtgcagctgccgctggccatgccctcg
atcatggcgggcatcaaccaggcgctgatgctgtcgttgtcgatggtggtgatcgcctcg
atgatcgccgtcggcggcttgggccagatggtgctgcgcggcatcggccggctcgacatg
ggccttgcgaccgtgggcggtctgggcatcgtgctgctggcgatttcgctcgaccggctg
acgcaggcgatgggcaagtcgcgccgcagcgcgggacggcgctggtggcacaccgggcct
gcggggctggcgctgcgtgtgctgcagcggctcgtcggcacgccgtcgcgcgatgcgggc
gcgcccgttcccgcactttccacgcaatga
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