Variovorax paradoxus EPS: Varpa_3413
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Entry
Varpa_3413 CDS
T01392
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3413
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Varpa_3413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Nucleotid_trans
Motif
Other DBs
NCBI-ProteinID:
ADU37598
UniProt:
E6UW26
LinkDB
All DBs
Position
3675836..3676843
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AA seq
335 aa
AA seq
DB search
MKNTRLLIARAVLALGFVAIGATAQAANDLPGKGITVQPLKSSLAEEAFQTLLVMRALEK
LGYTVEPMKDLEPATEHLAIANGDATFMANHWSLLHADFYKNSGGDAKLSRTGVYSDGAV
QGYLIDRKTAEQYNITNIAQLKDPAIAKLFDADGDGKADLTGCNPGWGCELAIENHLTAY
KLRDTVTHKQGSYAALMADTIARFKQDKPVLYYTWTPYWVSAVLRPGADVVWLQVPFSSS
QEGQADTRLPNGKNYGFQANREQIVANKAFVEKNPAAGKLFEVMKLPIGDINAQNLRMSQ
GANTQQDVERHADGWIRVHQQLFDGWIAEARAAAR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacccgtcttctcatcgcccgcgccgtgctcgcgctcggcttcgtcgccatc
ggcgcaaccgcacaggccgccaacgatctgcccggcaagggcatcaccgtgcagcccctc
aagagctcgctcgccgaggaagcattccagacgctgctcgtgatgcgcgctctcgaaaag
ctcggctacaccgtcgagcccatgaaggacctggagcccgccaccgaacacctggcgatc
gccaatggcgatgccaccttcatggccaaccactggagtctgctgcacgcggacttctac
aagaacagcggcggcgacgcgaagctctcacgcaccggcgtgtactcggacggcgcggtg
cagggctacctcatcgatcgcaagacggccgagcaatacaacatcaccaacatcgcgcag
ctgaaggacccggcgatcgccaagctgttcgacgcggacggcgacggcaaggccgacctc
actggttgcaacccgggctggggctgcgaactggccatcgagaaccatctgacggcctac
aagctgcgcgacaccgtcacccacaagcaaggcagctacgccgcgctgatggccgacacg
attgcccgcttcaagcaggacaagccggtgctgtactacacgtggacgccctactgggtg
agcgccgtgctgcgcccgggcgcggacgtggtgtggctgcaggtgcccttctcttcctcg
caggaaggccaggctgacacccggctacccaacggcaagaactacggcttccaggccaac
cgggagcagatcgtcgcgaacaaggcctttgtcgagaagaacccggctgcaggcaagctg
ttcgaggtgatgaagctgccgatcggcgacatcaatgcccagaacctgcgcatgagccag
ggcgccaatacgcagcaggacgtggagcggcacgcggatgggtggatccgggtgcaccag
caactctttgacggctggattgccgaggcgcgggctgctgcgaggtag
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