Variovorax paradoxus EPS: Varpa_3414
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Entry
Varpa_3414 CDS
T01392
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00020
Citrate cycle (TCA cycle)
vpe00620
Pyruvate metabolism
vpe00720
Other carbon fixation pathways
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Module
vpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpe_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Varpa_3414
00620 Pyruvate metabolism
Varpa_3414
09102 Energy metabolism
00720 Other carbon fixation pathways
Varpa_3414
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Varpa_3414
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GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
ADU37599
UniProt:
E6UW27
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Position
3676921..3678474
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AA seq
517 aa
AA seq
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MTTTIQQADLIESISAALQYISYYHPADYIAHLARAYEREQSPAAKDAIAQILTNSKMSA
TGHRPICQDTGIVNVFLKVGMDVRWGGFTGSLDDAINEGVRRGYNHPDNTLRASVVADPQ
FDRKNTKDNTPAVIFTEIVPGNTVEVTVAAKGGGSENKSKLVMLNPGDSVVDWVLKTVPT
MGAGWCPPGMLGIGIGGTAEKAALMAKESLMDDLDMHELQAKKASGAELSKVEALRIELY
EKVNALGIGAQGLGGLATVLDIKIKMYPTHAASKPVAMIPNCAATRHAHFVMDGSGAVYL
DPPSLDLWPDVNWAPDEKKSKRVNLDKLTPAEVASWKPGDTLLLNGKMLTGRDAAHKRIQ
DMLAKGEKLPVDFTNRVIYYVGPVDPVGDEAVGPAGPTTATRMDGFTEMMLAQTGLIAMI
GKAERGPVAIEAIKKHKSAYLMAVGGAAYLVSKAIKTAKVVGFEDLGMEAIYEFDVVDMP
VTVAVDAGGTSAHITGPAEWQKRIASGEFKTIMMEEA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacgatccagcaggccgacctgatcgaatcgatcagcgccgcgctgcagtac
atcagctactaccaccccgccgactacatcgcccacttggcccgcgcctacgagcgcgaa
cagagccccgctgccaaggacgccatcgcgcagatcctcaccaacagcaagatgagcgcc
acgggccatcgcccgatctgccaggacaccggcatcgtcaacgtgttcctcaaggtgggc
atggacgtgcgctggggcggcttcaccggcagcctggacgacgccatcaacgaaggcgtg
cgccgcggctacaaccaccccgacaacacgctgcgcgcctcggtcgtggccgatccgcag
ttcgaccgcaagaacaccaaggacaacacgcccgcggtgatcttcaccgagatcgttccg
ggcaacaccgtcgaagtgacggtcgcggccaagggcggcggcagcgagaacaagagcaag
ctcgtgatgctgaaccccggcgacagcgtggtcgactgggtgctcaagaccgtgcccacc
atgggcgccggctggtgcccgccgggcatgctgggcatcggcatcggcggcaccgccgag
aaggccgcgctcatggccaaggaaagcctgatggacgacctggacatgcacgagctgcag
gccaagaaggcttcgggcgccgagctcagcaaggtcgaggcgctgcgcatcgagctgtac
gagaaggtcaatgcgctcggtatcggcgcgcagggcctgggcggcctggccaccgtgctg
gacatcaaaatcaagatgtacccgacccacgcggcgagcaagcccgtggcgatgatcccc
aactgcgcggccacccgccatgcgcacttcgtgatggacggcagcggcgctgtctacctc
gatccgccatcgctggacctgtggcccgacgtgaactgggcgcccgacgaaaagaagagc
aagcgcgtgaatctcgacaagctcacgcccgccgaagtggcgagctggaagccgggcgac
acgctgctcctgaacggcaagatgctcacgggccgcgacgccgcgcacaagcgcatccag
gacatgctggccaagggcgagaagctgccggtggacttcaccaaccgcgtcatctattac
gtcggcccggtcgatccggtcggtgacgaggccgtgggccccgccggcccgaccaccgcc
acgcgcatggacggcttcaccgaaatgatgctggcccagaccggcctgatcgcgatgatc
ggcaaggccgagcgcggcccggtcgccatcgaggcgatcaagaagcacaagagcgcctac
ctcatggccgtgggcggcgccgcctacctggtgagcaaggcgatcaagaccgccaaggtg
gtcggcttcgaggacctgggcatggaagccatctatgaattcgacgtggtcgacatgccc
gtgacggtggcggtcgatgcgggcggcaccagcgcgcacatcaccggcccagccgagtgg
cagaagcgcatcgccagcggcgagttcaagaccatcatgatggaagaggcctga
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