KEGG   Variovorax paradoxus EPS: Varpa_3421
Entry
Varpa_3421        CDS       T01392                                 
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpX
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:vpe03110]
    Varpa_3421
Chaperones and folding catalysts [BR:vpe03110]
 Heat shock proteins
  HSP100
   Varpa_3421
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small AAA_22 AAA_5 Mg_chelatase RuvB_N MCM Sigma54_activat Sigma54_activ_2 AAA_7 AAA_14 NACHT AAA_16 AAA_33 AAA_18 IstB_IS21 AAA_28 TIP49 AAA_30 DEAD ABC_tran T2SSE TsaE ResIII AAA_24 nSTAND3 AAA_29 PduV-EutP RNA_helicase AAA_23 SKI AAA_25 PhoH AAA_21 AAA_8
Other DBs
NCBI-ProteinID: ADU37606
UniProt: E6UW34
LinkDB
Position
complement(3687298..3688563)
AA seq 421 aa
MAEKKGSSSEKTLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDELPAGEEARE
ARSDLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKGDDVELSKSNILL
IGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQ
RGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFLQ
IDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKAQRSITEVFREVEPEDLIKFG
LIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQMEGVDLEIRPAALKAIA
RKALARKTGARGLRSILEQSLIDTMFELPNATNVDKVVVEESTIDENKPPLLVYREAAKK
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggccgaaaaaaaaggctcctccagcgaaaaaacgctttattgctcgttctgcggcaag
agccagcatgaggtcaagaagctgatcgcgggcccttcggtcttcatctgcgacgagtgc
atcgatctctgcaacgaaatcattcgcgacgagctgccggccggtgaagaggcgcgcgaa
gcgcgcagcgacctgcccacgccgctggagatcaagaccaacctcgacaactacgtgatc
ggccaggagccggccaagcgcatgctgtcggtggcggtctacaaccactacaagcgcctg
cgccacaaggaaaaggccaagggcgacgacgtcgagctcagcaagagcaacatcctcttg
atcggccccacaggctcgggcaagacgctgctcgcgcagacgctcgcgcgcatgctcgac
gtgccctttgtaatggccgacgccaccacgctgaccgaagccggctacgtgggcgaagac
gtcgagaacatcatccagaagctgctgcagagctgcaactacgaagtcgagcgtgcccag
cgcggcatcgtctacatcgacgaaatcgacaagatctcgcgcaagtccgacaacccctcg
atcacgcgcgacgtgtcgggcgagggcgtgcagcaggccttgctcaagctcatcgaaggc
acaatggccagcgtgccgccccagggcgggcgcaagcacccgaaccaggacttcttgcag
atcgacacgaccaacatcctgttcatctgcggtggtgcgttcgcgggcctggagaaggtc
atcgaaaaccgcaccgaggcctcgggtatcggcttcggcgcgacggtcaagagcaaggcg
cagcgcagcatcaccgaggtgtttcgcgaagtcgaacccgaagacctgatcaagttcggc
ctgatccccgaactcgtgggccgaatgcccgtggtcgcatcgctcgcggaactctccgag
gatgcgctggtccagatcctgaccgagccgaagaacgcggtggtcaagcagttcaccaag
ctccttcaaatggaaggcgtggacctcgagattcgcccggcggcgctcaaggccattgca
cgcaaggcgctggcccgcaagacgggtgcacggggcctgcgttcgatccttgaacagtcg
ctgatcgacaccatgttcgaattgccgaacgcgaccaatgtcgacaaggtggtggtcgag
gaatcgaccatcgacgaaaacaagccaccgctgctcgtctaccgcgaagcagcgaagaag
gcgtaa

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