Variovorax paradoxus EPS: Varpa_3468
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Entry
Varpa_3468 CDS
T01392
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_3468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3468
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_3468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADU37653
UniProt:
E6UX17
LinkDB
All DBs
Position
3737293..3738876
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AA seq
527 aa
AA seq
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MAISLSLRRAFAAALPALALSFSAAACAETVLRTVPSSDLKILDPIWTTANITRNHGLMI
YDTLFGMDEKGAIKPQMVEKYTASPDNKVWTFTLRPGLKFHDGAPVTSQDVIASLARWAK
RDTLGQKMYEAMDSITAEGPNGFRMTFKQPFGVVLDALGKPNPLVPFIMPRRVAETPADK
QIEEMVGSGPFTLAKADFRPGDRVIYRKNAAYVPRKEAPSGLAGGKVVNVDRVEWVLLRD
PQTQVNALLNGEVDMVEAVPASGFTDMRTNPKIELVDVMPAGPFTAIYNHKVPPFNNPKA
LKAAMLAINQEAMLRAQATFRDFYKPCASIYLCGSMYSSDKTGFFTGKPQFEEARKLLKE
SGYDGKPVVILLPGDAPALNKMPAVYGQLLKQVGFNVDVQTTDWATLVTRRTKKDLPENG
GWNVFITFWGGVDASNPISYGPLTGNGDKGFFGWPTDPELEALKSRFIETTDLAQRKDIA
TQIQLRVLEGGVIAPLGEGKAPTAVRRGVVSGLLPSPAVLYWNVRKN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctatttcactctcgctgcgccgcgcgttcgcggccgccctgccggcattggcgctc
tcgttctcggccgcggcctgcgcggagactgtgctgcgcaccgtgccttcgtcggacctg
aagatcctcgacccgatctggaccaccgccaacatcacgcgcaaccacgggctcatgatc
tacgacacgcttttcggcatggacgaaaagggcgcgatcaagccgcagatggtcgagaaa
tacaccgccagtcccgacaacaaggtctggaccttcacgctgcgcccgggcctgaagttc
cacgacggcgcgcccgtcacctcgcaggacgtgatcgcctcgctcgcccgctgggccaag
cgcgacacgctcggccagaagatgtacgaggccatggacagcatcaccgcggaaggcccc
aacggctttcgcatgaccttcaagcagcccttcggcgtggtgctcgacgcgctgggcaag
cccaatccgctggtgccgttcatcatgcccaggcgcgtggccgaaacgcccgccgacaag
cagatcgaagagatggtcggctccggtcccttcacgctggccaaggcggactttcgcccg
ggcgaccgcgtgatctaccgcaagaacgccgcgtacgtgccgcgcaaggaagcgccatcg
ggcctcgctggcggcaaggtggtgaacgtggaccgcgtcgaatgggtgctgctgcgcgac
ccgcagacgcaagtcaacgctctgctcaacggcgaggtcgacatggtcgaggccgtaccc
gcctccggcttcaccgacatgcgaaccaacccgaagatcgagctggtggacgtgatgccc
gcaggccctttcacggcgatctacaaccacaaggtcccgcccttcaacaacccgaaggcg
ttgaaggcagccatgctcgccatcaaccaggaagccatgctgcgcgctcaggccaccttc
cgtgacttctacaagccatgcgcgtccatttacctgtgcggctcgatgtattcgagcgac
aagacgggcttcttcaccggcaagccgcagttcgaggaggcccgcaagctcttgaaggag
tcgggctacgacggcaagccagtcgtcatcctgctgccgggtgatgcgccggcgctcaac
aagatgcccgccgtctacggacagttgctcaagcaagtgggcttcaacgtcgacgtgcag
accaccgactgggccacgctcgtgacgcgccgcaccaagaaggaccttccggaaaacggt
ggctggaacgtcttcatcacgttctggggcggtgtggatgccagcaaccccatcagctat
ggcccgctgaccggcaacggcgacaagggcttcttcggctggccgaccgatccggagctc
gaagcgctgaagtcgcgcttcatcgaaaccaccgacctggcgcagcgcaaggacatcgcc
acgcagatccagcttcgcgtgctcgaaggcggcgtgatcgcgccgctcggcgaaggcaag
gcgcccaccgccgtgcgccgcggtgtggtgagcggcctgctgccctcgcccgccgtcctg
tactggaacgtgcgcaagaactag
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