Variovorax paradoxus EPS: Varpa_3476
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Entry
Varpa_3476 CDS
T01392
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3476
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_3476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3476
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_3476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ADU37661
UniProt:
E6UX25
LinkDB
All DBs
Position
complement(3746373..3747695)
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AA seq
440 aa
AA seq
DB search
MSFIKHLKTAALAVTLSVAGLQFAHADGNEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNL
VNTRDGGVGGVKLTWEEGETQYEVERGVEVYERLKQRPGIATWNPLSVGIAYALIDRVTA
DKVPLLTINHGRTDTTDGRVFKYIFPLLLNPYSETSGIVNYIAGKEGGTDKLKGKKIVVL
YHGSPYGKETIPVYELLAKKYGFTLQQIEVPHPGNEQQSQWLTIRRVKPDYVVLRGWGVM
NPVALKTAQKTGFPVDHIVGNVWSNSEEDVIPAGDAAKGYVAITTVAAGAQYPVLQDITK
IVYGAGKGNLQDTKRIGSVYHNLGVLNGILNVEAIRIAQAKFGKRTLTGDEIRWGLENLK
IDEARAAALGAKGLFHSINVTWDNHEGDGRVAFQQWDGSKWNVVSDWIAPDWKLLRPIIE
KSSLAYAKEKNVKVRKSIDD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcatcaagcacctgaaaaccgcggccctggccgtcaccctttccgtggccggc
ctgcagttcgcgcatgccgatggcaacgagcaattcttcccgctgcagagctaccgcgtc
ggcccctatgcggccggcggcacgggcttcttcggcggcttcatcgactacctgaacctc
gtcaacacgcgcgatggcggcgtgggcggcgtcaagctgacatgggaggagggcgagacg
cagtacgaagtggagcgcggcgtggaggtgtatgagcgcctgaagcaacgcccaggcatc
gcgacctggaacccgctgtcggtgggcatcgcctatgcgctcatcgatcgcgtgacggcc
gacaaggtgccgctgctcaccatcaaccacggccgcaccgacaccaccgacggccgcgtg
ttcaagtacatctttccgctgctgctcaatccgtacagcgagacctcgggcatcgtgaac
tacatcgcgggcaaggagggcggcaccgacaagctcaagggcaagaagatcgtggtgctg
taccacggctcgccctacggcaaggagaccattccggtctatgagctgctcgccaagaag
tacggcttcacgctgcagcagatcgaggtgccgcatccgggcaacgagcaacagtcgcag
tggctcaccatccgccgcgtgaagcccgactacgtggtgctgcgcggctggggcgtgatg
aacccggtggcgctcaagacggcgcagaagacgggctttccggtcgaccacatcgtgggc
aacgtgtggtccaactccgaggaagacgtgattccggcgggcgatgcggccaagggctac
gtggccatcaccacggtggcggccggcgcgcaatatccggtgctgcaggacatcacgaag
atcgtctatggcgcgggcaagggcaacctgcaggacaccaagcgcatcggcagcgtctat
cacaacctcggtgtgctcaacggcatcctgaatgtggaggccatccgcatcgcgcaggcg
aagttcggcaagcgcacgctcaccggcgacgagatccgctggggcctggagaacctgaag
atcgacgaggcgcgcgccgccgcgctcggtgccaagggcctgttccattcgatcaacgtg
acctgggacaaccacgaaggcgacggccgcgtggccttccagcaatgggatggcagcaag
tggaacgtggtgtccgactggattgcgcccgactggaagctgctgcggccgatcatcgag
aagtcgtcgcttgcgtatgcaaaggagaagaacgtcaaggtgcgcaagagcatcgatgac
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