KEGG   Variovorax paradoxus EPS: Varpa_3476
Entry
Varpa_3476        CDS       T01392                                 
Name
(GenBank) hypothetical protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02010  ABC transporters
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Varpa_3476
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_3476
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_3476
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    Varpa_3476
SSDB
Motif
Pfam: Peripla_BP_6
Other DBs
NCBI-ProteinID: ADU37661
UniProt: E6UX25
LinkDB
Position
complement(3746373..3747695)
AA seq 440 aa
MSFIKHLKTAALAVTLSVAGLQFAHADGNEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNL
VNTRDGGVGGVKLTWEEGETQYEVERGVEVYERLKQRPGIATWNPLSVGIAYALIDRVTA
DKVPLLTINHGRTDTTDGRVFKYIFPLLLNPYSETSGIVNYIAGKEGGTDKLKGKKIVVL
YHGSPYGKETIPVYELLAKKYGFTLQQIEVPHPGNEQQSQWLTIRRVKPDYVVLRGWGVM
NPVALKTAQKTGFPVDHIVGNVWSNSEEDVIPAGDAAKGYVAITTVAAGAQYPVLQDITK
IVYGAGKGNLQDTKRIGSVYHNLGVLNGILNVEAIRIAQAKFGKRTLTGDEIRWGLENLK
IDEARAAALGAKGLFHSINVTWDNHEGDGRVAFQQWDGSKWNVVSDWIAPDWKLLRPIIE
KSSLAYAKEKNVKVRKSIDD
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtctttcatcaagcacctgaaaaccgcggccctggccgtcaccctttccgtggccggc
ctgcagttcgcgcatgccgatggcaacgagcaattcttcccgctgcagagctaccgcgtc
ggcccctatgcggccggcggcacgggcttcttcggcggcttcatcgactacctgaacctc
gtcaacacgcgcgatggcggcgtgggcggcgtcaagctgacatgggaggagggcgagacg
cagtacgaagtggagcgcggcgtggaggtgtatgagcgcctgaagcaacgcccaggcatc
gcgacctggaacccgctgtcggtgggcatcgcctatgcgctcatcgatcgcgtgacggcc
gacaaggtgccgctgctcaccatcaaccacggccgcaccgacaccaccgacggccgcgtg
ttcaagtacatctttccgctgctgctcaatccgtacagcgagacctcgggcatcgtgaac
tacatcgcgggcaaggagggcggcaccgacaagctcaagggcaagaagatcgtggtgctg
taccacggctcgccctacggcaaggagaccattccggtctatgagctgctcgccaagaag
tacggcttcacgctgcagcagatcgaggtgccgcatccgggcaacgagcaacagtcgcag
tggctcaccatccgccgcgtgaagcccgactacgtggtgctgcgcggctggggcgtgatg
aacccggtggcgctcaagacggcgcagaagacgggctttccggtcgaccacatcgtgggc
aacgtgtggtccaactccgaggaagacgtgattccggcgggcgatgcggccaagggctac
gtggccatcaccacggtggcggccggcgcgcaatatccggtgctgcaggacatcacgaag
atcgtctatggcgcgggcaagggcaacctgcaggacaccaagcgcatcggcagcgtctat
cacaacctcggtgtgctcaacggcatcctgaatgtggaggccatccgcatcgcgcaggcg
aagttcggcaagcgcacgctcaccggcgacgagatccgctggggcctggagaacctgaag
atcgacgaggcgcgcgccgccgcgctcggtgccaagggcctgttccattcgatcaacgtg
acctgggacaaccacgaaggcgacggccgcgtggccttccagcaatgggatggcagcaag
tggaacgtggtgtccgactggattgcgcccgactggaagctgctgcggccgatcatcgag
aagtcgtcgcttgcgtatgcaaaggagaagaacgtcaaggtgcgcaagagcatcgatgac
tga

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