Variovorax paradoxus EPS: Varpa_3488
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Entry
Varpa_3488 CDS
T01392
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3488
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
Varpa_3488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ADU37673
UniProt:
E6UX37
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All DBs
Position
complement(3759964..3761373)
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AA seq
469 aa
AA seq
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MRRKQNVLAASGSSATASSAIASALNRRRFIGTAAALSAAGALAACGKKDAGAPPPVASA
DVGASGKKFAGQSLNLLFNQPHALAGKLLAQEFEALTGAKVTVTPVPYDQLHAQATLDVQ
SGANQFDVVDYFYHTLGALVADKVVVDVADRIARDAAQIEPGDFLPSLYDTYTLRDGRRW
GLPYDGDTHVLFYNTEIFGRHGLTAPKTWDDYYNAARLITEKESANGIYGAVVQGFKIPV
IVGSSYANRLAGFGGSFFTPDGKPALTSPQAIAAAEELARIVPYALPTPAETAFEHALPA
FLSGKAAMIDFWTDLGVTAQDPASSKIVDKWALVQLPVGGENKTPRAALNAGFGLGITAG
TKKTELAWEFIKWATSKDISLQQDVLPGSGIDPNRTSVLNHPDYIKAAPILQPQLKAAIG
DALVWPLQAQSPKLMDALTEQLALIVSGKKKPREALEAAQASWVQLLSA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgaaaacagaatgtccttgctgcgtccggctcgtcggccactgcgtcttccgcg
atcgcatcggcgttgaaccgccgccgattcatcggcactgcagccgctttaagcgctgcg
ggcgcgctggctgcctgcggcaagaaagacgccggggcgccgccgcccgtggcctcggca
gacgtgggcgcgagcggaaaaaaattcgcgggtcagtcgctgaacctgctgttcaaccag
ccgcatgcgctggcgggcaagctgctggcgcaggagttcgaagcgctcacgggtgccaag
gtgaccgtcacgccggtgccctacgaccagctgcatgcgcaggccacgctcgatgtgcag
tcgggcgcgaaccagttcgacgtcgtcgattatttctatcacacgctcggcgcgctggtg
gccgacaaggtggtggtcgatgtcgccgaccgcatcgcgcgcgacgccgcgcagatcgag
cccggcgacttcctgccgtcgctctacgacacctacaccttgcgcgatggccgccgctgg
ggcctgccttacgacggcgacacgcacgtcctgttctacaacaccgagatcttcggccgg
catgggttgacggccccaaagacctgggacgactactacaacgcagcccgcctgatcacc
gagaaagagtcggccaacggcatctacggcgcggtggtgcagggcttcaagattccggtg
atcgtgggatcgtcttatgccaaccggctggccggtttcggcggcagcttcttcacgccc
gacggcaagcccgcgttgaccagcccacaggccatcgccgcggcggaagagttggcgcgc
atcgtcccctatgccttgcccacgcccgcggaaacggcgttcgaacatgccttgcccgcg
ttcctgtcgggcaaggcggccatgatcgatttctggaccgacctgggcgtcaccgcgcag
gacccggcctcttcgaagatcgtggacaagtgggcgctggtgcagttgcccgtgggcggc
gagaacaagacgccgcgcgcggcattgaatgcgggcttcggcctcggcatcacggccggc
accaagaagaccgagttggcctgggaattcatcaagtgggccacgagcaaggacatctcg
ctccagcaggatgtgttgccgggcagcggcatcgacccgaaccgcacctcggtgctgaat
catcccgactacatcaaggccgcgcccatcctgcagccgcaattgaaggccgccatcggc
gatgcgctggtctggccgctgcaggcgcagagccccaagctgatggacgcgttgaccgag
cagctcgcgctgatcgtgtcgggcaagaagaagccgcgtgaggcgctggaggcggctcag
gcgagttgggtgcaactgctcagcgcatga
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