Variovorax paradoxus EPS: Varpa_3499
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Entry
Varpa_3499 CDS
T01392
Name
(GenBank) phospholipase C, phosphocholine-specific
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00562
Inositol phosphate metabolism
vpe00564
Glycerophospholipid metabolism
vpe00565
Ether lipid metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
Varpa_3499
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
Varpa_3499
00565 Ether lipid metabolism
Varpa_3499
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_3499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vpe02042
]
Varpa_3499
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
Varpa_3499
Bacterial toxins [BR:
vpe02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
Varpa_3499
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Phosphoesterase
PLipase_C_C
Motif
Other DBs
NCBI-ProteinID:
ADU37684
UniProt:
E6UX48
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Position
complement(3774243..3776513)
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AA seq
756 aa
AA seq
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MNSRRSFLAGTAKASAAALTLSAFPPSIRRALAIPANNKTGTINDVEHIVILMQENRSFD
HYFGTLAGVRGFGDRFTIPLPKGLSVWHQSDAKGKVVLPYHFDSRKGNAQRDGGTPHEWE
DSQRAWDNGRIHEWPRYKTPKAMGFHKEAEIPFQFSLANAFTLCDGYHCAMHAGTDPNRS
FHLTGTNGPTAQGTAFVLNEWDMLDGSPAGVETGYTWTTHAERLEAAGVSWICYQNMPDE
WGDNLFGAFRQFRRANRASGFPVSGGYLPNQPVFDSGQATPYHAYDPATDNPGNPLYKGI
ANTLPGNKPEEYLDAFRRDVKAGRLPHVSWINAPCFYSEHPEVSSPVQGAWFVQEVLDAL
TSVPEVWSKTVLLINFDENDGYFDHVPSPSAPSPLGDGTYAGKTTLSDTAMSAEYFNHPA
APDSVKQPKPDGRVYGPGPRVPLYVVSPWSRGGWVNSQVFDHTSVLRFIEARFGLEETNI
SPYRRAVCGDLTSAFNFGTPNGEALPVLAGKTSRPDADALRASQEFEADGVTPRPPIEPP
SDAQMPHQEIGVKPSRALPYELHVSARADPVAGKLKLLFANSGKAAAVFHVYDKLNLDRL
PRRYMVEAGKMLDDNWSAIADNGSDYDLWVLGPNGFHRHFKGSLQHIRADDAAIPEVRVC
YDIVNGNVHLEMRNDGKNACRFTVEAKAYRDDGPWTASVDGKASAQQHWELAASGHWYDF
SVTCDADPAYYRRFAGRVETGKHGVSDPAMGLRDLR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacgtcgaagctttcttgcgggcaccgccaaggccagcgccgccgcgctcacg
ctttccgcttttccaccgagcatccgtcgggcgcttgccattcctgccaacaacaagacc
ggcaccatcaacgatgtcgagcacatcgtcatattgatgcaggagaaccggtcgttcgac
cattacttcggcacgctggcgggtgttcgcggctttggtgaccgattcaccattccgttg
cccaagggtctgagcgtctggcaccaaagcgatgccaaagggaaggtggttttgccctat
cacttcgacagccgcaaaggcaacgcacagcgcgatggcggaacgccgcacgaatgggag
gacagtcaacgagcctgggacaacggccgcattcacgaatggccccgttacaaaaccccc
aaggcgatgggtttccacaaggaggcagagattccgtttcagttctcgctggccaatgcc
ttcacgttgtgcgacggttatcactgcgcaatgcacgcgggtaccgaccccaatcgcagc
tttcacctgaccggcaccaatggcccgactgcacagggaacggcttttgtcttgaacgag
tgggacatgctggacgggagtcctgcgggtgtggagaccggctacacgtggacaacgcat
gccgagcgactggaggcggctggtgtcagttggatctgctatcagaacatgcccgacgaa
tggggcgacaacctgttcggcgcgttccgccagtttcggcgcgccaatcgggcatccgga
tttcctgtatcgggcggctacctgccgaatcaacctgttttcgacagcggccaggcgacg
ccgtaccacgcatacgacccagcgaccgacaacccgggcaacccgctctacaagggcatt
gccaataccctgccaggcaacaagcctgaggaatacctcgacgcgttccggcgtgatgtg
aaggccgggcgcttgccgcacgtgagttggatcaacgcgccttgcttctactccgagcat
cccgaagtctccagtccggtccagggtgcgtggttcgtgcaagaggtcctggacgcgctg
acgtccgttcccgaggtctggagcaagacggtgttgctgatcaacttcgacgagaacgac
gggtacttcgaccacgtgccgtcgccgtcggcgccatcgccattgggggacggcacctat
gccggcaagaccacgctttcggacacggccatgagcgccgaatacttcaaccatccggcc
gctccagattccgtcaaacagcccaagcccgatggacgggtctacggccccgggccgcgt
gttccgctctacgtcgtctcaccctggagtcgtggcggctgggtcaactcgcaggtgttc
gaccacacctcggtgctgcgcttcatcgaagcccgtttcggtctggaagaaaccaacatc
tctccctatcgccgggcggtgtgtggcgatctgacaagcgccttcaacttcggcacgccg
aatggcgaagccttgccagtgctggccgggaagacgagcaggccagatgcggatgcgctg
agagcttcacaggagttcgaggcggatggcgtcaccccgaggccaccgatcgaaccgccg
tcagacgctcaaatgccgcatcaagaaatcggcgtcaaaccttcgcgagctctgccttac
gaactgcatgtcagcgccagggcagacccggttgccggcaagctgaagctgctgttcgcc
aactcgggcaaggccgccgccgtgttccacgtgtacgacaagctcaacctcgatcggctc
ccgcggcgatacatggtggaagcgggaaagatgctcgatgacaactggtcggcaattgcc
gacaacggcagcgactacgacctctgggtactcgggccgaacggctttcaccgccacttc
aagggaagtcttcagcacatacgagcagacgatgcggccattcccgaagtgcgtgtctgc
tacgacatcgtcaacggcaatgttcaccttgagatgcgcaacgatggcaagaacgcctgc
agattcaccgtcgaggccaaagcctatcgcgacgacggcccctggacggcgagcgtcgat
gggaaggcgagcgcacaacagcattgggagcttgcagccagcggccattggtacgacttt
tccgtcacctgcgacgccgacccggcgtactaccgtcgatttgcgggacgcgtggaaacc
ggcaagcacggtgtgagcgatccggcgatggggctgcgcgaccttcgctag
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