Variovorax paradoxus EPS: Varpa_3505
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Entry
Varpa_3505 CDS
T01392
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_3505
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_3505
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_3505
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
Varpa_3505
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Varpa_3505
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Varpa_3505
Prokaryotic type
Varpa_3505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
tRNA-synt_1f
CysS_C
RseA_N
Motif
Other DBs
NCBI-ProteinID:
ADU37689
UniProt:
E6UX53
LinkDB
All DBs
Position
complement(3781630..3783006)
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AA seq
458 aa
AA seq
DB search
MSLRIYNTLSRELEEFSPLQPGKVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKASGF
DVTYVRNITDIDDKIIRRAVENGESIRALTDRMIDALHEDADALGIARPTHEPRATDYIP
QMLSMIGTLEKKGLAYRAENGDVNYAIRKFPGYGKLSGKSIDELHAGERVAVLDGKDDPL
DPVLWKSAKASEPEEVKWASEFGAGRPGWHIECSAMACALLGETLDIHGGGEDLQFPHHE
NEIAQSEGANDKPLSNYWMHNGFIVTDNEKMSKSLGNFFLIRDVLKKYDAETIRFFVLRA
HYRRPLNYSDVHLDDARNSLKRLYTALDLVAPAEVTIDWTDPYAARFKAAMDEDFATPEA
VAVLFDLAGEVNRTRSATQAGLLKALGGCVQILQSDPKSFLRAGATLDDAAIQAQIDARA
AAKAAKNFAEADRIRQGLLEQGIVLKDSPTGTSWTVAK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgcatctacaacacgctgtcgcgtgaattggaggaattctccccattgcaa
cctggcaaggtgcgcatgtacgtttgcggcatgacggtctacgactattgccacctgggc
catgcccgctcgatgatcgccttcgacgtggtgcagcgctggctcaaggccagcggcttc
gacgtgacctacgtgcgcaacatcaccgacatcgacgacaagatcattcgccgcgccgtg
gaaaacggcgagagcatccgcgcgttgaccgatcgcatgatcgacgcgctgcacgaagac
gccgatgcgctgggcatcgcgcgccccacgcacgagccacgcgccaccgactacatcccg
cagatgctgtcgatgatcggcacgctcgagaagaagggcctggcttatcgcgccgagaac
ggcgacgttaactacgccatccgcaagttccccggctacggcaagctgagcggcaagtcg
atcgacgagctgcatgcgggcgagcgcgtggccgtgctcgacggcaaggacgacccactc
gaccccgtgctctggaagagcgcgaaggcgagcgagcccgaagaggtgaagtgggccagc
gagttcggcgctggccgtccgggctggcacatcgagtgctcggccatggcctgcgcgctg
ctgggcgaaacactcgacatccacggcggcggcgaagacctgcagttcccgcaccacgaa
aatgaaatcgcgcagagcgaaggcgccaacgacaagccgctgtccaactactggatgcac
aacggcttcatcgtgaccgacaacgagaagatgtccaagagcctgggcaacttcttcctg
atccgcgacgtgctgaagaagtacgacgccgagaccatccgcttcttcgtgctgcgcgcg
cactaccgtcggccgctcaactacagcgacgtgcatctggacgacgcgcgcaattcgctc
aagcgcctgtatacggcgctggacctggtcgcgccggccgaggtgacgatcgactggacc
gatccatatgccgcgcgcttcaaggccgcgatggacgaagatttcgcaacgcccgaagcg
gtggccgtgctgttcgacctggcgggtgaagtcaaccgcacgcgctcggccacgcaggcc
gggctgctgaaggcgctgggtgggtgcgtgcagatattgcaaagcgacccgaagagtttc
ctccgcgcaggcgcaacgctcgacgatgcggccatccaggcgcagatcgatgcgcgtgcc
gccgccaaggccgcgaagaatttcgccgaagccgatcgcatccgccagggattgcttgag
cagggcatcgtgctcaaggattcgcccactggcacgagctggaccgtcgcgaagtga
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