Variovorax paradoxus EPS: Varpa_3514
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Entry
Varpa_3514 CDS
T01392
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00260
Glycine, serine and threonine metabolism
vpe00460
Cyanoamino acid metabolism
vpe00630
Glyoxylate and dicarboxylate metabolism
vpe00670
One carbon pool by folate
vpe00680
Methane metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01230
Biosynthesis of amino acids
vpe01240
Biosynthesis of cofactors
vpe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Varpa_3514
09102 Energy metabolism
00680 Methane metabolism
Varpa_3514
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Varpa_3514
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Varpa_3514
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Varpa_3514
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Varpa_3514
Enzymes [BR:
vpe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Varpa_3514
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ADU37698
UniProt:
E6UX62
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All DBs
Position
3795235..3796479
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AA seq
414 aa
AA seq
DB search
MYQRNILVEQTDPEIWAAIQAENARQEHHIELIASENYASPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEHVDVAEQLAIDRVKQIFGADAANVQPHCGASANEAVMLAFLKPGDTIMGMS
LAEGGHLTHGMPLNMSGKWFNVVSYGLDANEAIDYDAMERKAHEHMPKLIIAGASAYSLH
IDFERFAKVAKDVGAIFMVDIAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIIL
MKSQHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEAMTPEFKAYQQQVVKNAKIVADTLT
ERGLRIVSGRTESHVMLVDLRSKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARITANLVADVLENPRDAANIDAVRAKVHALTSRFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaacgcaatattctggtcgaacagaccgaccccgagatctgggccgccattcaa
gccgaaaacgcgcgccaggaacaccacatcgagctgatcgccagcgagaactacgcctcg
ccggccgtcatgcaggctcagggctcgcagctcactaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgagcacgtcgacgtggccgagcaactggccatcgac
cgggtcaagcagatcttcggtgccgacgccgccaacgtgcagccgcattgcggcgcctcg
gccaacgaagccgtgatgctggcgttcctcaagcctggcgacaccatcatgggcatgagc
ctggccgaaggcggccacctgacccacggcatgccactcaacatgagcggcaagtggttc
aacgtggtgagctacggcctggacgccaacgaagccatcgactacgacgcgatggaacgc
aaggcgcacgagcacatgcccaagctgatcatcgcgggcgcctcggcctactcgctgcac
atcgacttcgagcgcttcgccaaggtggcgaaggacgtgggcgcgatcttcatggtcgac
atcgcccactacgccggcctcgtggccgcgggcgtgtaccccaatccggtgccgcacgcc
gacatcgtgacctccaccacccacaagagcctgcgcggcccgcgcggcggcatcatcctc
atgaagtcgcagcacgagaaggcgatcaacagcgcgatcttcccgggcctgcaaggcggt
ccgctgatgcacgtgatcgccgccaaggccgtcgcgttcaaggaagcgatgacgcccgag
ttcaaggcttaccagcaacaggtggtcaagaacgccaagatcgtggccgacacgctcacc
gagcggggcctgcgcatcgtgagcggccgcaccgagagccacgtgatgctggtcgacctg
cgttcgaagggcatcaccggcaaggaagccgaagccgtgctgggcagcgcccacatgacg
atcaacaagaacgcgattccgaacgaccccgaaaagccgatggtcaccagcggtgtgcgc
atcggcaccccggccatgaccacccgcggtttcaaggacgaagaggcccgcatcaccgcg
aacctggtcgccgacgtgctcgagaacccgcgcgacgcggcgaacatcgatgcagtgcgc
gccaaggtgcacgcgctgacgagccgcttccccgtctatcgctga
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