Variovorax paradoxus EPS: Varpa_3520
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Entry
Varpa_3520 CDS
T01392
Name
(GenBank) type IV pilus assembly protein PilW
KO
K02672
type IV pilus assembly protein PilW
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpe02044
]
Varpa_3520
02035 Bacterial motility proteins [BR:
vpe02035
]
Varpa_3520
Secretion system [BR:
vpe02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Varpa_3520
Bacterial motility proteins [BR:
vpe02035
]
Pilus system
Pilus assembly proteins
Varpa_3520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilW
N_methyl
Motif
Other DBs
NCBI-ProteinID:
ADU37704
UniProt:
E6UX68
LinkDB
All DBs
Position
complement(3802437..3803417)
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AA seq
326 aa
AA seq
DB search
MAKRVPEFAGRLRERGVTLVELLVATAVALVVVLAATAAFVASQRLFTANADAQAVEESL
RFAGFVVRSVARQAGYSDHAPDAREPQGSEGAAGSTGTTASSSDPADLDIVGASDTRVSG
VGDSHGAHGTRGINASDSLRVRFFGRSRSDGDGTEPDGTMVDCMGFAQPGPAADTPVSAD
RAWSFFYVAEAADREPELYCKYRSARGGAFSAQPLARGIEVFKVVYGHDADGNGAPEQWL
DAVQLEAMAASGDKVAEEWRKVVGLRVGMVARSAHGRGGRQEADEVLYPLGTDFSELSFR
PAADGRLRRVATFTVMLRNALRAPAS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgggttcctgagttcgccggccgcttgcgcgaacgcggtgtgacgctggtc
gaactgctggtcgccacggctgttgcgctggtcgtcgtgctcgcggccacggccgccttt
gtcgccagccagcgcttgttcacggccaatgccgacgcgcaggcggtggaggagtcgctg
aggttcgcgggcttcgtcgtcaggagcgtcgcgcggcaggcgggctattcggaccacgcg
cccgacgccagggaaccccaggggtccgaaggcgcggcaggcagcaccggcaccacggca
tcgtcgagcgaccccgccgacctcgacatcgtgggtgcgagcgacacccgcgtcagcggc
gtcggcgacagccacggcgcgcacggcacgcgcgggatcaacgcaagcgattcgctgcgg
gtccgcttcttcggccgcagccgttccgatggcgacggcaccgagcccgacggcaccatg
gtcgattgcatggggttcgcccagcccggtccggcggcggacacgcccgtctccgcagac
cgcgcctggagttttttctatgtcgctgaagccgcggacagggagcccgagctctactgc
aagtaccgcagcgcaaggggcggcgcgttcagtgcgcaaccgctggcgcgcggcatcgag
gtgttcaaggtcgtctacggccacgacgccgacggcaacggcgcccccgagcagtggctg
gatgccgtgcagctcgaagccatggccgcctccggagacaaggtggccgaagaatggcga
aaggtcgtcggcctgcgcgtcggcatggtggcgcgcagcgcgcacggccggggcggacgg
caggaagcggacgaggtgctctatccgctgggcaccgatttctccgaactcagcttcagg
cccgcggccgatggccggctgcggcgcgtggcgaccttcacggtgatgctgcgcaatgcg
ttgagggcgccggcatcgtga
DBGET
integrated database retrieval system
