KEGG   Variovorax paradoxus EPS: Varpa_3522
Entry
Varpa_3522        CDS       T01392                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00740  Riboflavin metabolism
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
vpe01240  Biosynthesis of cofactors
vpe02024  Quorum sensing
Module
vpe_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Varpa_3522
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_3522
Enzymes [BR:vpe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Varpa_3522
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Varpa_3522
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ADU37706
UniProt: E6UX70
LinkDB
Position
3804183..3805310
AA seq 375 aa
MPSHEQDAQHIATALRLASDALLLTDPNPRVGCVLCDAEGRVLGQGHTQKAGGPHAEVMA
LRDAAAQGHSVEGATAYVTLEPCSHHGRTGPCCDALIAAGIERVVASLADPNPLVAGQGF
ERLRAAGVEVEVGPGADESRELNIGFFSRMVRKTPWVRLKVAASLDGKTGLENGMSQWIT
SEPARADGHAWRARASAVLTGVGTVLEDNPRLDVRLVPTPRQPHLVVVDSRLQTPPDAHI
FIAGRPVWIYAAVRDEAKAAALEARGATVTCLANADGKVDLGAMLKDLAARGVNELHVES
GHKLNGSLIREGCVDELLVYLAPKLIGRGLDMASHIHADGPLTSLAGVLPLEFKSVDMFA
PDLRIVARVTGRDRF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgccttcacacgaacaagacgcgcagcacatcgcgacagccctgcgcctggcgtccgac
gccttgctgctgaccgatccgaacccgcgcgtcggctgcgtgctgtgcgacgccgagggg
cgcgtgctgggccaggggcatacgcagaaggccggcggtccgcatgccgaggtgatggcg
ttgcgcgatgcggcggcgcaaggccactcggtcgaaggcgcgacggcctacgtcacgctg
gagccctgttcgcaccacggccgcaccgggccttgctgcgatgcgctgattgcggcgggc
atcgagcgggtcgtggcgtcgctggccgatccgaacccgctggtcgcgggccagggtttc
gagcggctgcgtgcggcgggtgtcgaggtcgaggtcggtcccggtgccgacgaatcgcgc
gagctcaacatcggcttcttcagccgcatggtccgcaagacgccgtgggtgcggctcaag
gtggctgcttcgctggacggcaagacgggccttgaaaacggcatgagccaatggatcacc
tccgagcccgcgcgcgccgatggccacgcctggcgcgcccgcgcgagcgctgtgctgacc
ggcgtcggcacggtgctcgaagacaacccgcgcctggacgtccgtctggtcccgacgccg
cgccagccgcatctggtcgtcgttgacagtcgcctccagacaccgccggacgctcacata
ttcatagcaggccgcccggtgtggatctacgcggccgtacgggacgaagccaaggctgcc
gcgctggaagcccgcggcgccacggtcacttgccttgccaatgccgacggcaaggtcgat
ctgggcgcgatgctgaaagatttagcagcgcgcggcgtcaacgagctgcacgtcgagtcg
ggccacaagctcaatggctcgctgattcgcgagggctgcgtcgacgaactgctggtctac
ctcgcgcccaagctgatcggccgagggctcgacatggccagtcacattcacgcagacggt
ccgctcacctcgctggcgggcgttctccccctggaattcaagtccgtggacatgttcgcg
ccggaccttcgcatcgtggcgcgggtgacgggaagggacaggttctag

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