Variovorax paradoxus EPS: Varpa_3534
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Entry
Varpa_3534 CDS
T01392
Name
(GenBank) hypothetical protein
Organism
vpe
Variovorax paradoxus EPS
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
DUF4011
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
NAT10_TcmA_helicase
DEAD
nSTAND3
AAA_22
TrbH
MeaB
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ADU37718
UniProt:
E6UX82
LinkDB
All DBs
Position
3815119..3820296
Genome browser
AA seq
1725 aa
AA seq
DB search
MNAAIAPLLQLLDTADTHGGLQTDDVLSLVLPLLREVSALHEQGKVAALGSAFAYRVNDT
PALVLAQPEGAEPRQNRAAIAPLEAPAASVLRVVGEHRMTLDADEGVSVENLALMADAAP
DALPTRPVYLPGYTAWELRFAHHDALTDILCLGQVLASLSCGLDFTDSEELGRFVANRAN
LFALNRRLHPVVGAVIGEMTALDRHERARDLPSVISRLETYRDQPLDLGLDRIAPAKDGA
GQRRQAIRVHLRDRLFDLSRRNRLLHFKPSQTHVNLTVASVPLVVDIKNIRVDQLCVWDG
RFASDIATCDPVPLARWLRFEDQPYLPGALDRILQEARRDRSEYGFSQLSLVIAFLRWHN
LKEGEAERAERIASPLLMLSVELTRKKGVKDQYLLEAASSEAQVNPTLRHHLRQLYGIVL
PESIDLRETTIEQFHAQLAAQIAATEPGVQLRLVKQPEIELIHQRARQRLEQFKRRTRVR
NPGAQPVAAQDFSYAKDDFRPLGLQLFHSKVRPVPLTLRDAVGARPLPRAPQMASTAAQT
EQQTYSLHESTGNPYQWDVDLTSVTLGNFNHRKMSLVRDYSALSESEIASDAFDRVFSLQ
PRQVDAETPAALPLADQWPVVQADATQTAAVALARTGTSYIIQGPPGTGKSQTITNLIAD
YVGRGQRVLFVCEKRAAIDVVFHRLRQQGLDELCCMIHDSQGDKKAFVQNLKKTYEHWLA
APEELDAETRERTQLVDTMDADLKALERFDAAMRDVPEHLAVAVRTLMARLIALKPHDPA
LTPLQAEALPAFAAWRKHEDLVARLHLAVTESLGVPYLSAHAFAQLAPVLLRQERPLARL
VDLSDRAAEQTGPHRDALTDAWPPLGDAPTLWGDALAVVADARRVAALAARGHLSLLDTA
HPASLAFGEAMAQRRALQQVLNEAAARTSHWKDKFSPGDTEAGLAQAKAQQGSLLRWLQP
SWWRLSGELKRRYDFAKHAVRPQPSQVLEELLAEHTARAAVGKQAAQIEATYGCSDPDDF
VQQLDALRRGDANGSGVRAAFHKHLRTEPGASRNVERLAALGERTDALDALWHDLLDDPA
AQPLGSLEALARTLREQADTLPTVLPHLQELADADPALAKALRTLPLAPDAIEYAVAREG
LERVYRTERWLPRFDSAALARHAQRLAEGERKLLDRNARTLAAAVRQRFREHVRTSALPA
SQLDAGGKLFKKSYNAGRRELEHEFGKTMRYKAIRELASGETGQVVRDMKPIWLMSPLSV
SDTLPLAADLFDVVIFDEASQIPVEEAVPALYRAPQIIVVGDEMQLPPTSFFSSGRDPED
DTVSVEDEGDRIAVVLDADSLLNQGARNLPATLLAWHYRSRYESLIGFSNAAFYAGNLFT
IPDRSLPSDARDEILVQSRAPTEESVAANVDTLLSRAISFHRVTDAVYENRINDGEARHI
AQLVRELLKRETGRSLGIVAFSEAQQTEIEAELDALGAIDTDFAARLEAEYVREEDDQFC
GLFIKNLENVQGDERDIIILSICYGPNPEGRMLMNFGPINQRGGEKRLNVIFSRARHHMA
VVSTIRHEAITNDHNEGAAALKQFLRYAECLSRGDSATARRVLESMNPLTRTSGAQHARA
DEVTAQLAAALRARGHAVDEQVGQSRFRCDLALRAPEAGHYALGILVDTATHYENRNVLE
RYVSRPRVLDAFGWQVVQVLAKDWLHAPEAVLEQIESALRTGRSG
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccatcgctcccctgctgcaactgctggacaccgccgacacccacggcggc
ctgcagaccgacgacgtgctgagcctcgtgctgccgctgctgcgcgaagtctccgcattg
cacgagcaaggcaaggtcgccgcgctcggcagcgccttcgcttaccgcgtcaacgacacg
cccgcgcttgtcctcgctcagcccgaaggcgccgagccgcgccagaaccgcgcagccatc
gcaccgctcgaagcgcccgccgcctcggtgctgcgcgtggtcggcgaacaccgcatgacg
ctcgatgccgacgaaggcgtctcggtcgagaacctcgcgctcatggccgacgccgcgccc
gacgcgctgccgacgcgccccgtctacctgcccggctacaccgcgtgggaattgcgattc
gcacatcacgacgcgctgaccgacatcctctgcctcggccaagtgctcgccagcctttcg
tgcggcctcgacttcaccgacagcgaggaactcggccgcttcgtcgcgaaccgcgccaac
ctcttcgcgctcaaccgccggctgcatccggtggtgggcgcggtgatcggcgagatgacc
gcgctcgatcgccacgaacgcgcgcgcgacctgccctcggtgattagccggctcgagacc
taccgcgaccagccgctggacctgggcctcgaccgcatcgcacccgcgaaagacggtgca
ggccagcgccgccaggcgatccgcgtgcacctgcgcgatcgcttgttcgatctctcgcgc
cgcaaccgcctgctgcacttcaagccgagccagacgcatgtgaacctcacggtggcgagc
gtgccgctggtggtcgacatcaagaacatccgcgtcgaccagctctgcgtgtgggacggc
cgcttcgcgagcgacatcgccacctgcgaccccgtgccgctcgcgcgctggctgcgcttc
gaagaccagccctacctgccgggcgcgctcgaccgcatcctgcaggaggcgcggcgcgac
cgctccgagtacggcttctcgcagctctcgctggtcatcgcgttcctgcgctggcacaac
ctgaaggaaggggaagccgagcgggccgagcgcatcgcctcgccgctcctcatgctgtcg
gtcgagctcacgcgcaagaagggcgtgaaggaccagtacctgctcgaagctgcttcgagc
gaagcgcaggtgaacccgacgctcagacaccacctgcgccagctctacggcatcgtgctg
cccgagagcatcgacctgcgcgagaccaccatcgagcagttccacgcccaactggccgcg
cagatcgccgcgaccgaacccggcgtgcaactgcggctggtgaagcagcctgagatcgag
ctgatccaccagcgcgcccgccaacggctcgagcagttcaagcggcgcacccgcgtgcgc
aaccccggcgcgcagccggtggcggcgcaggacttcagctatgcgaaggacgacttccgc
ccgctcggcctgcagctctttcacagcaaggtgcggccggttccgctgaccctgcgcgat
gcggtcggcgcacggcccttgccgcgcgcgccgcagatggcatcgaccgccgcacagacc
gagcagcagacgtattcgttgcacgagagcaccggcaatccgtaccaatgggatgtcgac
ctcacctcagtgacgctcggcaacttcaaccaccgcaagatgtcgctggtgcgcgactac
tcggcactgagcgaatcggaaatcgcgagcgacgccttcgaccgcgtgttctcgctgcag
ccgcgccaggtcgatgccgaaacgcccgccgcgctaccgctcgccgaccagtggcccgtg
gtgcaagccgatgccacgcagaccgccgccgtggcgctcgcgcgcaccggcaccagctac
atcatccaggggccgcccggcacggggaagtcgcagaccatcaccaacctcatcgccgac
tacgtggggcgcgggcaacgggtgctgttcgtctgcgagaaacgcgccgccatcgacgtg
gtgttccaccggttgcggcagcagggactggacgagctgtgctgcatgatccacgactcg
cagggcgacaagaaggccttcgtgcagaacctcaagaagacctacgagcactggctcgcg
gcgcccgaggaactggatgcggagacccgcgagcgcacgcagctcgtcgacacgatggat
gccgacctcaaggcgctcgaacgcttcgatgccgcgatgcgcgatgtgcccgagcacctg
gccgtggcggtgcgcacgctgatggcgcggctgatcgcgctcaagccgcacgatcccgct
ttgacaccgttgcaggccgaggccctgcccgctttcgctgcctggcgcaaacatgaggac
ctggttgcgcgcttgcacctcgcggtcaccgaaagcctgggcgtgccgtatctgtcggcg
catgcgttcgcgcaactcgcgcccgtgttgctgcggcaggagcggccgcttgcacgactg
gtcgacctcagtgatcgcgcggcggagcagaccggcccgcaccgcgatgcattgaccgac
gcctggccgccgctgggcgatgcgcccacgctctggggcgacgcgctggccgtggtggcc
gatgctcgccgcgtggctgcgctcgcggcgcgcgggcatctctcgctgctcgacactgcg
cacccggcgagcctcgcgttcggcgaagcgatggcgcagcgccgcgcgttgcagcaagtc
ctgaacgaagccgcggcacgcaccagccattggaaggacaagttctcgccaggcgacacc
gaagccggcctcgcccaggccaaggcgcagcagggttcgctgctgcgctggctccagccc
tcgtggtggcggctgtcgggcgaactcaagcgccgctacgacttcgccaagcatgcggtg
cgtccgcaaccgagccaggtgttggaagaactgctggccgagcacacggcccgcgcggcg
gtcggcaagcaggccgcgcagatcgaggccacctacggttgcagcgaccccgacgacttc
gtgcagcagctcgatgccctgcgccgtggcgatgccaacggcagcggcgtgcgtgcagcc
ttccacaagcacttgcgcaccgagcccggcgcgagccgcaacgtcgaacggctggccgcc
ctcggcgagcgcaccgacgcgctcgatgccctgtggcacgacctgctcgacgacccggcc
gcgcaaccgctgggctccctcgaagcactcgcccgcacgctgcgcgaacaggccgacacc
ctgccgaccgtgctgccgcacctgcaggaactggccgatgccgacccggccctggccaag
gccctgcgcacgctgccgctcgcacccgacgccatcgaatacgccgtcgcgcgcgaaggc
ctggagcgcgtctaccgcaccgagcgctggctgccgcgcttcgacagcgccgcgctcgcg
cgccatgcgcagcgcctggccgagggagagcgcaagctgctcgaccgcaacgcccgcacg
ctcgccgccgcggtgcgccagcgctttcgggagcacgtgcgcaccagcgccctccccgcg
agccagctcgacgctggcggcaagctcttcaagaagagctacaacgcgggccggcgcgag
ctcgaacacgagttcggcaagaccatgcgctacaaggcgatccgcgaactcgcctcgggc
gagaccgggcaagtggtgcgcgacatgaagccgatctggctcatgagcccgctctcggtg
tccgacacgctgccgctcgccgccgacctcttcgacgtggtgatcttcgacgaggcgagc
cagatcccggtggaagaagccgtgcccgcgctctaccgcgcgccgcagatcatcgtggtg
ggcgacgagatgcagctgccgccgacgagcttcttctcctcgggccgcgaccccgaggac
gacaccgtctcggtcgaggacgaaggcgaccgcatcgccgtggtgctcgacgccgacagc
ctgctgaaccagggcgcgcgcaacctgccggccacgctgctcgcctggcactaccgcagc
cgctacgagtcgctcatcggcttttcgaacgcggccttctatgcgggcaacctcttcacc
attccggaccggagcctgccttcggacgcgcgcgacgagatcctcgtgcagtcgcgcgcg
ccgaccgaagaatcagtcgccgcgaatgtagacaccctgctctctcgcgccatcagcttc
caccgcgtgaccgatgcggtgtacgagaaccgcatcaacgacggcgaggcgcgccacatc
gcacagttggtgcgcgagctgctgaaacgcgagaccgggcgcagcctgggcatcgtcgcg
ttctccgaagcgcagcagaccgagatcgaggccgaactcgacgcgctgggcgccatcgac
accgacttcgccgcgcggctggaagccgagtacgtgcgcgaggaagacgaccagttctgc
ggcctcttcatcaagaacctggagaacgtgcagggcgacgagcgcgacatcatcatcctg
agcatctgctacggcccgaaccccgagggccgcatgctgatgaacttcggcccgatcaac
cagcgcggcggcgagaagcggctcaacgtgatcttcagccgcgcgcggcatcacatggcg
gtggtctcgacgattcgccacgaggcgatcaccaacgaccacaacgaaggcgccgcggcg
ctcaagcagtttttgcggtatgcggagtgtctgtcgcgcggcgattcggcgaccgcgcgg
cgcgtgctcgaaagcatgaacccgctcacgcggacgagcggtgcgcagcatgcccgtgcg
gacgaggtgacggcgcagcttgcggccgcgctgcgtgcgcgcggccatgcggtcgacgaa
caggtgggacagtcacgctttcgctgcgacctcgcgctgcgggcgccggaggccgggcac
tacgcgctgggcatcctcgtggacaccgcgacgcactacgagaaccgcaacgtgctcgag
cgctatgtctcgcgcccgcgcgtgctcgatgcgttcggatggcaggtggtgcaggtgctc
gccaaggactggctgcatgcgccggaggccgtgctcgagcagatcgagtcagccttgcga
accggccgttcgggctga
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