Variovorax paradoxus EPS: Varpa_3604
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Entry
Varpa_3604 CDS
T01392
Name
(GenBank) putative circadian clock protein, KaiC
KO
K08482
circadian clock protein KaiC
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Varpa_3604
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
AAA_22
IstB_IS21
AAA_16
nSTAND3
SLFN-g3_helicase
MEDS
NPHP3_N
Zeta_toxin
GvpD_P-loop
RecA
Rad51
AAA
AAA_18
NACHT
PhoH
CbiA
AAA_7
AAA_30
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ADU37788
UniProt:
E6UYG4
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Position
3897738..3899240
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AA seq
500 aa
AA seq
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MEAKASRLGGRKNGLLGIGVPGLDDVLGGGIEPNRLYLVEGTPGAGKTTIALQFLLEGAR
AGESVLYVTLSETEQELRGVANSHGWDLSGIHVREMLPAQDSLHPEEQYTMFHPSEVELS
ETTLRILSDVDTLKPSRIVFDSLSELRLLSGTSLRYRRQILALKQFFAGRQCTVLLLDDM
TATEHDLQVQSIAHAVLRLEQLNSDYGSARRRLLVVKYRGQAYRGGFHDYKIHRGGLQVF
PRLVASEHATSGPLVKMPSGIAELDDLLGGGLEKGTSTLFVGAPGTGKSSVAVQFAVSAA
RRGECAALFIFDESVNTLRTRCAGLGMDLEPYIASGHLRIKQVDPAELSPGELVHEIRLA
VTEHAATVVVIDSLNGYLNAMPDERFLIVQLHELLTYLGQAGVATLLVGAQHGLIGMQMQ
TPVDASYLADAVVLLRYFEFEGEVRQAISVLKKRGGAHERTIRDFSMTSSGLHVGEPLRH
FRGILSGIPVPIDGVTATPP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaaggcatcacgcctcgggggacggaaaaacggtctgctgggcatcggcgtg
ccaggtttggacgacgtgctcggtgggggcatcgagcccaaccgcctctacctggtggag
ggaacgcccggcgccggcaagacgaccatcgccctgcagttcctgctcgagggcgccagg
gcgggcgagtcggtcctgtacgtcacgctctcggaaaccgaacaggaactgcgcggcgtg
gccaattcgcacggttgggacctgtcggggatccacgttcgcgagatgctccccgcgcag
gacagcctccaccccgaagagcagtacacgatgttccacccctcggaggtggaactgagc
gaaaccacgctgcgcatcctcagcgacgtcgacacgctcaagccatcgcgcatcgtcttc
gactcgctgtcggagttgcggctgctgtcgggcacgtcgctgcggtaccgccggcagatc
ctcgcgctcaagcagttcttcgcgggccggcaatgcaccgtgctgctgctggacgacatg
accgccaccgagcacgacctgcaggtgcagagcatcgcgcacgccgtgcttcggctcgag
cagctcaattccgactacggctcggcgcggcgccgcctgctggtggtcaagtaccgtggg
caggcctatcgcggcggcttccacgactacaagatccatcgcgggggcctgcaggtgttt
ccgcggctcgtggcctccgagcatgcaaccagcggaccgctggtcaagatgcccagcggc
atcgcggaactggacgatctgctgggaggcggtctcgagaagggaacgagcaccctgttc
gtcggggcgccgggcacgggcaaatcgtcggtggcggtgcagttcgccgtttccgccgcc
cggcgcggcgaatgcgccgcgctcttcatcttcgacgagagcgtcaacacgctgcgcacg
cgctgcgccggcctgggaatggatctggagccgtacatcgcgtcgggccacctgcgcatc
aagcaggtcgaccccgccgagctctcgccaggcgagttggtccacgagatccgcctggcc
gtgaccgagcacgccgcaacggtcgtcgtcatcgacagcctgaacggctatctcaacgcc
atgcccgacgagcgctttctgatcgtccagttgcatgaactgctcacctacctcgggcag
gccggcgtggccacgctgctggtcggcgcgcagcacgggctgatcggcatgcagatgcag
acgccggtcgatgccagctacctggcggatgcggtcgtcctgctgcgctacttcgagttc
gagggcgaggtccggcaggccatctcggtgctgaagaaacgcggcggcgcgcacgagcgg
accattcgcgacttctcgatgaccagcagcgggttgcatgtgggcgaacccctgcgccac
ttccggggcatcctgagcggcattccggtgcctatcgatggcgtcaccgccactccgccg
tga
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