Variovorax paradoxus EPS: Varpa_3612
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Entry
Varpa_3612 CDS
T01392
Name
(GenBank) Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00630
Glyoxylate and dicarboxylate metabolism
vpe00680
Methane metabolism
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Varpa_3612
09102 Energy metabolism
00680 Methane metabolism
Varpa_3612
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Varpa_3612
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Paralog
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
2Fe-2S_thioredx
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
ADU37796
UniProt:
E6UYH2
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All DBs
Position
complement(3906998..3908785)
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AA seq
595 aa
AA seq
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MTTAMRAPEPVRLATLDELRGQIRRKGKLKGRQPDHVALEEVQALLGPGPHRRDLLIEHL
HRLNDEWQCLHDRHLVALAREMNLPMAEVFEVATFYHHFEVLRGDDQPAALTVRVCDGLS
CELAGARDLLQRLPAMLGADVRVIAAPCVGRCEQAPVAVIGQAPVVRATAANVKAAVDQD
ARAHGLPADDGVFDAAAAGPVSITSSPEETAPAYVGYQAYRARGGYQLAAAVASGARPVD
DVLKTMTDSGLRGLGGAGFPAGRKWGIVRQQLAPRLMAVNIDEGEPGTFKDRTYLERDPH
RFLDGLLIAATVVGIDACYVYLRDEYHGCRAILERELALLQANPPCALPRIELRRGAGAY
ICGEESAMIESIEGKRGEPRMRPPYIAQIGLFGRPTLEHNFETLYWVRDIVERGAAWFSD
FGRNGRHGLRSFSVSGRVREPGVKLAPAGITLRELVDEFCGGMLPGHDLYAYLPGGASGG
ILPASMSDIPLDFDTLQPHGCFIGSAAVIVLSQKDRARDAALNMMHFFEHESCGQCTPCR
VGTGKAARLMAEPHWDHATLEDLNQVMVDASICGLGQAAPNPVRCVQKYFPHEVL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccatgcgcgcacctgaaccggtgcgactagccacattggacgaactccgc
ggtcagatacgccgcaagggcaagctcaagggacgccaacccgaccacgtggcactcgag
gaggttcaggcgctgctcgggcccgggccgcacaggagggatctgctgatcgagcatctg
caccgcctgaacgacgaatggcaatgcctgcacgaccggcatctcgttgcgctcgctcgg
gaaatgaatctgccgatggccgaggtcttcgaagtggcgaccttctaccaccacttcgaa
gtgcttcgcggcgacgaccagcccgccgcgctgaccgtgcgcgtctgcgacgggctctca
tgcgaactggcgggtgcccgcgatctcttgcagcgcctgccggcaatgctcggcgccgac
gtgcgggtgatcgcggcgccttgtgtcgggcgctgcgagcaggcgccggtggcggtgatc
ggccaggcccccgtggtcagggccacggcggccaatgtcaaggcagcagtcgatcaggac
gcaagggcgcacgggctgcctgccgacgacggggtattcgatgccgcagcggcgggaccg
gtgtccatcacctcatcgccagaagaaacggcacctgcctatgtcggctatcaggcatac
agggcgcgcggtggttatcagctcgcggccgcggtggcctccggcgccaggccggtggac
gacgtactgaaaacaatgaccgattccggcctgcgcggccttggaggcgcgggctttccc
gcagggcgcaagtggggcatcgtgcggcagcaattggcgccgcgcctgatggccgtcaac
atcgatgaaggcgagcccgggacgttcaaggatcgaacctatctggagcgtgaccctcat
cgattcctcgatgggctgctgatcgccgccacagtggtcggcatcgacgcctgctatgtc
tatctgcgcgacgagtaccacggctgccgcgcgatcctcgaacgcgaactcgcactgttg
caggcaaatccgccttgtgcgttgccgcgcatcgagcttcggcgtggcgcgggcgcgtac
atctgcggcgaggagtccgcgatgatcgagagcatcgaaggcaagcggggcgagccacgc
atgcggccgccctacatcgcgcagatcgggttgttcggccggccgacgctcgaacacaac
ttcgagaccctctattgggtgcgcgacatcgtcgagcgtggtgcggcatggttcagcgat
ttcggccgcaacggacgccatggcctccggtcgttcagcgtgagcggccgggtgcgggag
cctggcgtcaagctggcgccggcaggcatcacattgcgcgaactggtggacgagttctgc
ggcgggatgctcccggggcacgacctctacgcctacctgcccggcggagcgtcaggcggc
atcctgccagccagcatgagcgacattccgctcgacttcgacaccctgcagccgcacggc
tgcttcatcggctcggccgcggtcatcgtgctgagccagaaggaccgtgctcgcgacgcc
gcgctgaacatgatgcatttcttcgagcacgagagctgtggccagtgcacgccgtgccgt
gtcggtaccggcaaggcggcccggttgatggcggaaccccattgggaccacgccacgctg
gaggatctgaaccaggtgatggtcgacgcgtcgatctgcgggctcggtcaggcggcgccg
aatccggttcgctgcgtccagaaatattttccccacgaggtgctttga
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