Variovorax paradoxus EPS: Varpa_3659
Help
Entry
Varpa_3659 CDS
T01392
Name
(GenBank) L-carnitine dehydratase/bile acid-inducible protein F
KO
K01796
alpha-methylacyl-CoA racemase [EC:
5.1.99.4
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00984
Steroid degradation
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
vpe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
Varpa_3659
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Varpa_3659
Enzymes [BR:
vpe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.99 Acting on other compounds
5.1.99.4 alpha-methylacyl-CoA racemase
Varpa_3659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_transf_3
Motif
Other DBs
NCBI-ProteinID:
ADU37843
UniProt:
E6UZN5
LinkDB
All DBs
Position
3952850..3953725
Genome browser
AA seq
291 aa
AA seq
DB search
MSSLTPFLPLEGVRVLSLALNLPGPAALLRCRQMGANCLKLEPPAGDPMALYNQPAYAAL
HEGIAIETADLKTEAGQQQLHAELAKTDVLLTSFRPSALRKLGLDWPALQARHPSLSQVA
IVGAPGERAEEPGHDLTYVAESGLVTGTELPPTLYADMGGALLASEAVLTAVLRRARGGG
KASGIYLEVALNASADWLALPRTWGLTQPTGAVGGAHAGYRVYPCADGRVAVAALEPHFA
NRLCEAAGVTPPDMMATATHKALAAWLATRTRAELDAMSRERDVPLLTLAD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctcacccccttcctgccgctcgaaggcgtgcgcgtcctgagccttgcgctc
aacctgcccggcccggccgcgctgctgcgctgccgccagatgggcgctaactgcctgaag
ctggagccgcctgccggcgacccgatggcgctctacaaccagccggcgtatgccgcgctg
cacgaaggcatcgccatcgaaaccgcggacctcaagaccgaagcaggccagcagcaactg
cacgccgaacttgccaagaccgacgtgctgctcacctcgttccgcccctccgcactgcgc
aagctcggcctcgattggccggcgctgcaggcgcgtcatccgtcgctgtcgcaggtggcc
atcgtcggtgcgccgggcgagcgcgccgaggagccgggccacgacctcacctacgtcgcc
gagagcggtctcgtgaccggcaccgagctgccgcccacgctctacgccgacatgggcggc
gcgctgctcgcgagcgaagcggtgctgacggccgtgttgcgtcgcgcccgcggcggtggc
aaggcaagcggcatttatctggaagtggccctgaacgcctcggccgactggctcgccctg
ccgcgcacctggggcctgacgcagcccacgggcgcggtcggtggcgcgcatgcgggctat
cgcgtgtatccctgtgccgatggccgcgtggcggtggcggcgctggagccgcatttcgcg
aatcgcctctgcgaagcggccggcgtgacgccccccgacatgatggccacggccacgcac
aaggcgctggccgcatggctcgcgacccgcacgcgtgccgagctcgatgcgatgagccgc
gagcgcgacgtgccgctgctcacgctggccgattga
DBGET
integrated database retrieval system
