Variovorax paradoxus EPS: Varpa_3780
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Entry
Varpa_3780 CDS
T01392
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_3780
03036 Chromosome and associated proteins [BR:
vpe03036
]
Varpa_3780
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Varpa_3780
Chromosome and associated proteins [BR:
vpe03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Varpa_3780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
MarR
HTH_Crp_2
AsnC_trans_reg_3
HxlR
MarR_2
NirdL-like_HTH
Cas_Csd1
LexA_DNA_bind
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ADU37961
UniProt:
E6V1V8
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Position
4075700..4076137
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AA seq
145 aa
AA seq
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MAILRVLLLDSRKTLQEIGNEVGLSPTSCWTRIKKLEAQGVIKRYTVDVDPAKLGYHDSV
IVQVTLESHTDETLYDFGRVLATIPEIQEAYLVSGDYDYYIRIAVRDTRDYERLLREKLY
KIPGIRHSKSHFVLRVLKETSVPVI
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctccgcgtgctgctgctcgattcgcgcaagaccctgcaggaaatcggcaac
gaggtcggcttgtcgcccaccagttgctggacgcgcatcaagaagctggaggcgcaaggc
gtcatcaagcgctacacggtcgatgtcgatccggccaagctcggttatcacgattcggtg
atcgtgcaggtcacgctcgagagccacaccgacgagacgctctacgacttcggccgcgtg
ctcgcgaccattcccgagatccaggaggcctacctcgtctcgggcgactacgactactac
atccgcatcgccgtgcgcgacacgcgcgactacgagcggctgctgcgcgaaaagctctac
aagattcccggcatccggcacagcaaatcgcacttcgtgctgcgggtgctgaaggaaacg
agcgtgcccgtcatctga
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