Variovorax paradoxus EPS: Varpa_3789
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Entry
Varpa_3789 CDS
T01392
Name
(GenBank) transcriptional regulator, LuxR family
Organism
vpe
Variovorax paradoxus EPS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_5
GerE
HTH_23
HTH_28
HTH_29
Sigma70_r4_2
Sigma70_r4
HD
HTH_24
MerR
HTH_38
HTH_30
HTH_17
HTH_Tnp_ISL3
DUF2089
HTH_10
HTH_20
HTH_Tnp_1
HTH_8
MerR_1
Motif
Other DBs
NCBI-ProteinID:
ADU37970
UniProt:
E6V1W7
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All DBs
Position
4083086..4084600
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AA seq
504 aa
AA seq
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MPDDTTIAVFDAVRALAFIGDLSMGQPTDHSLRTAWLAGMIATEARCDPSQIEAARHVAL
LRWSGCTANAQEFADFLDDDVQGRQAMLASQKPRAPQQQQQQQQHQQQHQPRSAAIPSAM
LDMASIHCEIAGDIANTLGLLPDTEAALRAIFETYDGGGVPGLLQGDEVPLATYVVALAS
DLEIFSRLYGLDEALTLARGRANSVYPGALVDASTPHVATWMKTLDAPTPPWTDAADQPA
SMLQRVGLELVGDVIDLKLPWMTGYSRRVAQLARDGSAHAGLDEALCHRTYKAGLIHGIG
RASVPNAIWNAPEPLPASSLERMRLVPYWTSRAAGQIDGLAAEAEIASFAFERRDGSGYY
RGRSGTAMPPEAQFVAAAERWVSLRTRRPWREEFSEAEALGCMKEDVEAGRFDQHVVDAL
LACAMSHAPSRSAAPQQQRGEQALSERELEVLRCISKGENTKEVARALGISPRTVRTHVE
RVFLKLECSTRAAATLKAATRGLI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgacaccaccatcgccgtattcgacgccgtgcgcgccctcgccttcatcggc
gacctgagcatgggccagccgaccgaccattcgctgcgcaccgcgtggctcgcgggaatg
atcgcgaccgaggcccgctgcgacccttcgcagatcgaagccgcccggcacgtcgcgctg
ctgcgctggtcgggctgcacggccaatgcgcaggagttcgcggacttcctggacgacgac
gtgcagggccggcaagccatgctcgcatcgcagaagccgcgggcaccgcagcagcagcag
caacagcagcagcaccaacaacaacatcaaccgcgcagcgcggccatcccgagcgcgatg
ctcgacatggccagcatccattgcgaaatcgccggcgacatcgcgaacacgctgggcctc
ctccccgacaccgaagcggcgctgcgcgcgatcttcgagacctacgacggcggcggcgtg
cccggcctgctgcaaggcgacgaggtgccgctcgcaacctacgtcgtggcgctggcgagc
gacctcgaaatcttcagccgcctctacgggctcgacgaagcgctcacgctggcccgcgga
cgcgcgaacagcgtgtaccccggcgcgctcgtcgacgccagcacgccacacgtcgcgacg
tggatgaagacgctggacgcccccaccccgccgtggaccgatgcggccgaccagcccgca
tcgatgctgcagcgcgtcgggctggagctggtgggcgacgtgatcgatctcaagctgccc
tggatgacgggttactcccgccgcgtggcccagctggcgcgcgatggcagtgcgcacgcg
ggcctggacgaggccctgtgccaccgcacgtacaaggccgggctgatccacggcatcggc
cgcgcgtcggtgcccaacgcgatctggaacgcgcccgagccgctgccggcttcgtcgctg
gagcgcatgcggctggtgccgtactggacctcgcgcgccgcagggcaaatcgacgggctc
gcggccgaagcggaaatcgcgtccttcgctttcgaacggcgcgatggctcgggttactac
cgcggccggtcgggcacggcgatgccgccggaggcgcagttcgtcgcggcggccgagcgg
tgggtttcacttcgcacgcggcgtccgtggcgggaggagttcagcgaagcggaggcgctg
gggtgcatgaaggaagacgtggaggcggggcgcttcgatcagcacgttgtcgatgcgctg
cttgcctgcgcgatgtcgcatgcgccttcgaggtccgcggcgccgcaacagcagcgcggc
gagcaggctttgtcggagcgcgaactggaggtgctgcgctgcatcagcaagggcgagaac
accaaggaagtcgctcgcgcgctgggcatcagcccgcgcacggtgcgaacgcatgtcgag
cgcgtgttcctcaagctcgaatgttcgacgcgcgcggccgcgacgttgaaggcggcgacc
cgcgggctgatctga
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