Variovorax paradoxus EPS: Varpa_3804
Help
Entry
Varpa_3804 CDS
T01392
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3804
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_3804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3804
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_3804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ADU37985
UniProt:
E6V1Y2
LinkDB
All DBs
Position
4098557..4099870
Genome browser
AA seq
437 aa
AA seq
DB search
MKFQNSFRWIAAALGAACLLGAAGAIAQGGKVRIAVVTPLTGPLSVVNGPGQNAARMLAD
AINKGELPAPYNTGKGMGGKEVELIFLDENGGNAKQVAEFRGLVERQGADAVMGFGSAAT
CVAIAPVAEELKVLTVMSTCATPRIFEDGKYEYVFRTTGSTTMDSVALALYAQARMPAAK
TVGHINPNYALGQDAWRDFSAALKSVKPGIEVVAEQWPTPGSGQYAAEISALATKRPDII
HTSMAGADLEAFFTQMRPRGLHERSKIYAPLLELSMYRMGAQVPDGVVFTARGTNGLFAP
KSALNDWFTANYQGRYKDAPVYTAYQYTNTLLALKAAYDSAAKAGATGTPALIKALKGRS
IETPSGTIRLALGNGHQAIQDMAVGEAFYDVEKKTVSVRNAMRFPAECVNPPEGIKSEAW
LAGGMAGRKCEGTVAAK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccagaacagctttcgctggatcgccgccgcgctcggcgcggcctgcctgctc
ggcgccgcgggcgcgattgcgcaaggcggcaaggtgcgcatcgccgtcgtcacgccattg
accggccccctttcggtggtgaacggtccgggccagaacgccgcgcgcatgctggccgac
gccatcaacaagggcgagctgccggcaccgtacaacaccggcaaggggatgggcggcaag
gaagtcgaactgatcttcctcgacgagaacggcggcaacgcgaagcaggtcgcggagttc
cgcgggctggtggagcggcaaggcgcagacgcggtgatgggcttcgggtcggccgccacc
tgcgtggcgatcgcaccggtggccgaggaactcaaggtcctcacggtgatgtccacctgc
gcaacgccgcgcatcttcgaggacggcaagtacgaatacgtcttccgcacgacgggctcc
accacgatggacagcgttgcgctcgcgctgtacgcgcaggcccgcatgccggccgcaaag
acggtgggccatatcaacccgaactacgcgttggggcaggatgcatggcgcgatttcagc
gccgcgctcaagtcggtgaagcccggcatcgaggtggttgccgagcaatggccgacgccg
ggttcggggcagtacgcggcggagatctcggcgctcgccaccaagaggcccgacatcatt
cacacgtcgatggccggtgccgacctggaggcgttcttcacccagatgcgcccgcgcggc
ctgcatgagcgctcgaagatctatgcgccgctgctcgaactgtccatgtaccggatgggc
gcacaggttccagacggcgtggtgttcaccgcgcgcggcaccaacgggctgttcgcgccc
aagtcggcgctcaacgactggttcacggccaactaccagggccgctacaaggacgcgccg
gtctacaccgcctaccagtacaccaatacgctgctcgcgctcaaggccgcctacgatagc
gcagccaaggctggcgccaccggcacgccggccctgatcaaggcgctcaagggccgaagc
atcgagaccccgagcggcaccatccgcctcgcgttgggcaacggccaccaggccatccag
gacatggccgtcggcgaggccttctacgacgtcgagaagaagacggtatcggtgcgcaat
gccatgcgctttccggccgaatgcgtgaacccgcccgaggggatcaagagcgaggcctgg
ctggcgggcggaatggcggggcgcaagtgcgaaggcacggtcgccgccaagtga
DBGET
integrated database retrieval system
