Variovorax paradoxus EPS: Varpa_3828
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Entry
Varpa_3828 CDS
T01392
Name
(GenBank) ABC sugar transporter, periplasmic ligand binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_3828
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_3828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3828
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_3828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ADU38009
UniProt:
E6V206
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All DBs
Position
4123827..4124786
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AA seq
319 aa
AA seq
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MTNRRIFSGIALAVCALASMPALAQNKAMVMGVSVPAATHGWTGGVVYWANRTKAELEKQ
YPGIKVFVKTAGSATEQANQVQDLQTVNKIDTLVILPFESAPLTKPVAQVKSKGVFVTVV
DRGLTDPNAQSAYVAGDNPGFGKVAGEYMAKTMGGKGNVVILRGIPTVIDNQRVDAFNEV
MKANPGIKVLDAKHGNWNRDDAFKVMQDYLTRFKQIDAVWASDDDMAVGVQKAIEQAKRD
DVKLVVGGAGAKGYIKKVMDGDKIVSADVTYAPSMIADAMNLTAKSRVEGGAMPATTIIP
SVLVTKENAAKYYFPDSPF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacagaagaatcttttcgggcatcgcactggccgtgtgcgccctcgccagcatg
cccgcgctggcccagaacaaggcgatggtgatgggcgtctcggtgcccgccgccacgcac
ggctggaccggcggcgtcgtgtactgggccaaccgcaccaaggccgaactggagaagcag
tacccgggcatcaaggtcttcgtgaagaccgcgggctcggccaccgaacaggccaaccag
gtgcaggacctgcagacggtcaacaagatcgacacgctggtcatcctgcccttcgaatcg
gcgccgctcaccaagccggtggcacaggtcaagtccaagggcgtgttcgtgacggtggtc
gaccggggcctgaccgacccgaacgcgcagagcgcctacgtggccggcgacaacccgggc
ttcggcaaggtggcgggcgagtacatggccaaaacgatgggcggcaagggcaacgtggtc
atcctgcgcggcattccgaccgtcatcgacaaccagcgcgtggacgccttcaacgaagtg
atgaaggcgaaccccggcatcaaggtgctcgatgccaagcacggcaactggaaccgcgac
gatgcgttcaaggtcatgcaggactacctcacgcgcttcaagcagatcgatgcggtgtgg
gcctccgacgacgacatggccgtaggcgtgcagaaggccatcgagcaggccaagcgcgac
gacgtgaagctggtggtgggcggcgccggtgccaagggctacatcaagaaggtgatggac
ggcgacaagatcgtctcggccgacgtgacctacgcgccgagcatgatcgccgacgcgatg
aacctcacggcgaagtcacgcgtggaaggcggtgcaatgccggcgacgacgatcattcct
tcggtgctggtgaccaaggagaacgcggcgaagtactacttccccgactcgccgttctga
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