Variovorax paradoxus EPS: Varpa_3840
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Entry
Varpa_3840 CDS
T01392
Name
(GenBank) RIO-like kinase
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Varpa_3840
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vpe01001
]
Varpa_3840
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpe03009
]
Varpa_3840
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Varpa_3840
Protein kinases [BR:
vpe01001
]
Serine/threonine kinases: Other
RIO family [OT]
Varpa_3840
Ribosome biogenesis [BR:
vpe03009
]
Eukaryotic type
Pre-40S particles
Kinases
Varpa_3840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
TCAD9
APH
YrbL-PhoP_reg
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
ADU38021
UniProt:
E6V2V5
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All DBs
Position
4134526..4135377
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AA seq
283 aa
AA seq
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MKTPQRLQTLVDEGLIDTVVRQLMSGKEAMVYVVRCGEETRCAKVYKEADKRSFRQAVDY
TENRRVKNTREARAMAKGTKFGRQVTEAIWQSAEVDALYRLAAAGVRVPTPHNFLEGVLL
MDLVTDANGDAAPRLNDVAFSPEDALLHHASLLREVMRMLCAGVVHGDLSEFNVLLAEDG
PVIIDLPQAVDAAGNNHAKRMLLRDVENLRNFFGQYAPALLKTHYGDEIWQLYERGLLRP
ETELSGTFVRETGPVDLSNVLREVDDARAEEAARLLRMQTPRQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacaccacaaagactgcagaccctcgtggacgagggcctgatcgataccgtcgta
cgccagctcatgagcggcaaggaagccatggtgtatgtcgtgcgctgcggcgaggaaacg
cgctgcgccaaggtctacaaggaggccgacaagcgcagcttccgccaggccgtcgactac
accgagaaccgccgcgtcaagaacacgcgcgaggcccgcgccatggccaagggcacgaag
ttcggccgccaggtgaccgaagccatctggcagagcgccgaggtcgatgcgctctaccgc
ctggccgccgctggcgtgcgcgtgccgacgccgcacaacttcctggaaggcgtgctgctg
atggacctggtgaccgacgccaacggcgacgccgccccgcgcctgaacgacgtggccttc
tcgcccgaagacgccctgttgcaccacgcgagcctcttgcgcgaagtgatgcgcatgctg
tgcgcgggcgtggtgcacggcgatctctcggagttcaacgtgctgctggccgaagacggc
ccggtgatcatcgacctgccgcaggccgtggacgccgccggcaacaaccacgccaagcgc
atgctgctgcgcgacgtggagaacctgcgcaacttcttcggccagtacgcgcccgcgctg
ctgaagacgcactacggcgacgagatctggcaactctacgagcgcggcctgctgcggccc
gagacggagctttcaggcaccttcgtgcgcgagaccggcccggtcgatctgagcaacgtg
ctgcgcgaggtggacgatgcgcgcgcggaagaggcggcgcggctcttgcgcatgcagacg
ccgcgacaatag
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