Variovorax paradoxus EPS: Varpa_3851
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Entry
Varpa_3851 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3851
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_3851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ADU38032
UniProt:
E6V2W6
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All DBs
Position
complement(4147338..4149569)
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AA seq
743 aa
AA seq
DB search
MGQASPARGRTVAPLPPLPQLPQLPQLPQLQWARLSRLSLGVGLAFGAGSALAQPAGATN
SGNNNSLAPVQVEASRHTPLAMDEPTQTGSRLGLTPLETPASIEVLTGDTIRARGDVSVV
EAVTRATGITGSPGPGNGGTALAARGFTGHGSVMQLFDGTRLYAGAGTVTFPFDTWSVDR
IEVLRGAASVMFGEGAIGGAINVVPKKPTRGPIQNEALVTAGSDATRQVAFGSGGAINDM
LSYRFDISHRKTDGFMVRGDAESLAVGGAVRLDVSPQLQFTLSHDEGRQSPQRYYGVPLI
NGRVSSLTREQNYNPDDAEIKYRDRWTRFDAQWTPSDTVTVRNQLYRLDSKRHWRNSETY
TYNATTRRVTRGDYLEIGHDQEQIGNRTDATFKHSLFGLKNQVLVGFDANRIDFQHTNDS
PYGGRSVVEPFVFNPGYYASPVAYTPRYKTKTSTYAFFAEDKLAFNEQWSVVGSLRWDRA
KVVRTDLQNAANNLQKTFAYATGRLGVVYAPDASQSFYAQVARAADPLTSVISTSATQAP
FELSTGKQVEIGYKRQLAEGRGAWSIAAYRLEKDKLLSRSASDPTVNQQVGKQSSEGIEA
TLDLALTSTLRLEANIAKLRARYDDFNEVVGGRVISRAGNTPFGVPEEAANLDLNWRFLP
QWEADFGVRYVGSRQVDAANSRKIGSYTVVDAGVSWQANPSLKLAFRAYNLANRTYPLSF
SNSGNQWLLGRPRSVEVSALVKF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagcatcgccggcgcgcggtcgcacggttgcgccgttgccgccgttgccgcag
ctgccgcagctgccgcaattgccgcaattgcaatgggcacgcctttcacgtctttctttg
ggcgtgggactggccttcggcgcaggcagcgcgctggcccagccggccggagcgacaaac
agcggcaacaacaacagcctcgcacccgtgcaggtagaagccagccgccacacgccgctc
gcgatggacgagcccacccagaccggcagccgcctgggcctcacgccgctggaaacgccc
gcgagcatcgaggtgctgacaggcgacaccatccgcgcacgcggcgatgtttcggtggtc
gaagcggtgacccgcgccaccggcatcaccggctcgcccggccccggcaacggcggcacg
gccctggcggcccgcggcttcaccggccacggctcggtgatgcagcttttcgacggcacg
cgcctctatgcgggcgccggcaccgtcacctttccgttcgatacctggtcggtcgatcgc
atcgaggtgctgcgcggcgcggcgtcggtgatgttcggtgaaggcgccatcggcggcgcg
atcaacgtcgtgcccaagaagcccacgcgcggcccgatccagaacgaggcgctcgtcacg
gcgggctccgatgcaacgcgtcaggtcgccttcggcagcggcggggcgatcaacgacatg
ctttcctatcgcttcgacatcagccaccgcaagaccgacggcttcatggtgcgcggcgat
gccgagagcctggccgtgggcggcgcggtgcggctcgatgtgtcgccgcagctgcaattc
acgctctcgcacgacgagggccgccagtcgccgcagcgttactacggcgtgccgctcatc
aacggccgcgtgagcagcctcacccgcgagcagaactacaaccccgacgacgccgagatc
aagtatcgcgaccgctggacccgcttcgatgcccaatggacgcccagcgacaccgtcacc
gtgcgcaaccagctctaccgcctggacagcaagcgccactggcgcaacagcgagacctat
acctacaacgccaccacgcgccgcgtgacgcgcggcgactacctggaaatcggccatgac
caggagcagatcggcaaccgcaccgacgccaccttcaagcactcgctgttcggcctgaag
aaccaggtgctggtgggtttcgatgcgaaccgcatcgacttccagcacaccaacgattcg
ccgtacggcggccgctcggtggtcgaaccgttcgtcttcaaccctggctactacgcctcg
cccgtggcctacacgccgcgctacaagaccaagaccagcacctacgccttcttcgccgaa
gacaagctggccttcaacgaacaatggtcggtggtcggtagcctgcgctgggaccgcgcg
aaggtcgtgcgcaccgacctgcagaacgccgccaacaacctccagaagaccttcgcgtac
gccaccggccgcctcggcgtggtgtatgcgcccgatgcctcgcagtcgttctacgcccag
gtggcgcgcgcggccgatccgttgacctcggtgatcagcacatcggccacgcaggctccg
ttcgagttgagcaccggcaagcaggtcgagatcggctacaagcgccaactggccgaaggc
cgcggcgcctggtccatcgcggcctaccgcctcgagaaggacaagctgctctcgcgttcc
gcgagcgaccccaccgtcaaccagcaggtaggcaagcagtcgtccgaaggcatcgaggcc
acgctcgatctggcgctgacctccacgctcaggctcgaagccaacatcgccaagctccgt
gcgcgctacgacgacttcaacgaggtcgtcggcggccgcgtgatctcgcgcgccggcaac
acgccgttcggcgtgcccgaagaggccgctaacctcgacctcaattggcgcttcctgccc
cagtgggaggccgatttcggtgtgcgctacgtcggctcgcgccaggtcgatgcggccaac
tcgcgcaagatcggctcctacaccgtggtcgatgcgggtgtgagctggcaggccaacccg
tcgctcaagctcgcgttccgcgcctacaacctggccaatcgcacgtacccgctgtcgttc
tcgaacagcggcaaccaatggctgctgggccggccgcgctcggtcgaagtttcagcgctg
gtgaaattctga
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