Variovorax paradoxus EPS: Varpa_3948
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Entry
Varpa_3948 CDS
T01392
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_3948
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_3948
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_3948
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
Varpa_3948
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Varpa_3948
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Varpa_3948
Prokaryotic type
Varpa_3948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
LytR_C
Motif
Other DBs
NCBI-ProteinID:
ADU38120
UniProt:
E6V401
LinkDB
All DBs
Position
complement(4258378..4260285)
Genome browser
AA seq
635 aa
AA seq
DB search
MIQITLPDNSRREFPGPVSVAEVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDAKLQII
TPKDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDISYERPFTPEDMAAI
EARMRELIAQDYDVVKKMTPRAEVIEVFKSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDM
CRGPHVPNTRFLKVFKLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAEK
RDHRKLGKELDLFHIDEVAPGVVFWHPKGWAVWQAVEQYMRGIYRDTGYWEVKGPQILDK
SLWEKTGHWQNYRDNMFTTESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQC
HRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILDECIAYTEQLQKVYADFGFTDILYKVA
TRPENRVGSDELWDKAEHAVMESLRRSGVDFIISPGDGAFYGPKIEYTLRDAIGRQWQCG
TMQVDFNTAERLGGEYVTESSGRAHPVMLHRAIVGSLERFIGMLIEHHSGALPAWLAPVQ
VAVLNISEGQADYAAQVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQKLPYILVVGDKEK
EAGAVAVRARGNQDLGAMSLESFVQRLVQDVADKR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgatccagatcacgctcccagacaactcgcgccgcgagttcccaggcccggtttcggtg
gccgaagtggcccagtccatcggccccggtctcgccaagatgacggtggccggcaaggtc
gatggccggctcgtcgatgccagcgacgtcatcgaccacgacgccaaactgcagatcatc
acgcccaaggacgacgagggcctggagatcattcgccactcgacggcccatttggtcggg
catgcggtcaagcagctctatccgacggccaagatggtgattgggccagtgatcgacgag
ggcttctattacgacatttcctacgagcgccctttcacgcccgaggacatggccgccatc
gaggcgcgcatgcgcgagctgatcgcgcaggactacgacgtcgtgaagaagatgacgcct
cgtgccgaggtgatcgaggtcttcaagtcgcgcggcgaagactacaagctgcgcctcgtc
gaggacatgcccgacgagcaggcgatgggtctctactaccaccaggaatacgtggacatg
tgccgcggcccgcacgtgccgaacacgcgcttcctgaaggtcttcaagctcacgaagctg
gctggcgcttattggcggggcgatgccaagaacgagcagctgcagcgcatctacggcacg
gcctgggccgacaagaagcagctcgaccagtacatccagcgcatcgaggaagccgaaaag
cgcgaccaccgcaagctcggcaaggaactcgacctgttccatatcgacgaagtggcgccg
ggcgtggtgttctggcatcccaagggatgggcggtctggcaggcggtcgagcagtacatg
cgcggcatctaccgcgacacgggctactgggaagtgaagggcccgcagatcctcgacaag
agcctgtgggagaaaacgggccactggcagaactaccgcgacaacatgttcacgacggag
tcggaaaagcgcgagtacgcgctgaagccgatgaactgcccgggccacgtgctgatcttc
aagagcgacctgcgcagctatcgcgacctgccgctgcgctacggcgagttcggccagtgc
catcgcaatgaacccagcggcgcgctgcacgggatcatgcgcgtgcgcggcttcacgcag
gacgacgggcacatcttctgtacggaagaccagatcctcgacgaatgcatcgcttacacg
gagcagttgcagaaggtctacgccgacttcggcttcacggacatcctctacaaggtcgcc
acgcggccggagaaccgtgtcggttccgacgagctgtgggacaaggccgagcacgcggtg
atggagtcgctgcggcgctcgggcgtcgacttcatcatctcgccgggcgatggcgccttc
tacggtccgaagatcgaatacacgctgcgcgatgccatcggccgccagtggcagtgcggc
acgatgcaggtcgacttcaacacggccgagcgcctgggcggcgaatacgtgacggaatcg
agcggccgcgcgcaccccgtgatgctgcatcgcgccatcgtgggcagcctggagcgcttc
atcggcatgctgatcgaacaccactccggcgcgctgcccgcatggctcgctccggtgcag
gtggcggtgctcaatatcagcgaaggacaggccgactacgctgcgcaagttgcgaaaacg
ctgcaaaatcaagggcttagggttcagcttgatctgcacaacgagaagattacgtataaa
atacggaagcattcgttgcaaaagctcccttacatcctcgtcgtgggcgacaaggaaaag
gaagcaggtgccgtcgcagtgcgcgcccggggcaatcaagacctcggagcaatgtccctc
gaatcgttcgtgcaaaggctcgttcaggatgttgccgacaagcgttga
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