Variovorax paradoxus EPS: Varpa_3970
Help
Entry
Varpa_3970 CDS
T01392
Name
(GenBank) iron-sulfur cluster binding protein
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_3970
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
Varpa_3970
Transfer RNA biogenesis [BR:
vpe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Varpa_3970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_16
QueG_DUF1730
Fer4_7
Fer4_9
Fer4_10
Fer4
Fer4_21
Fer4_6
Fer4_18
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
ADU38142
UniProt:
E6V423
LinkDB
All DBs
Position
complement(4282036..4283115)
Genome browser
AA seq
359 aa
AA seq
DB search
MIVSHPLVVRIQALARELGFSQIGIAGVDLSSAEDGLMQWLAHGFHGEMQYMETHGTRRA
RPAELVPGTVSVITARMDYLPRDTPPEWQAIEFDRLARPGEAIVSVYARGRDYHKVLRNR
LAKLAEKIAEEVGPFGHRAFTDSAPVLEAELASRSGQGWRGKHTLVLDRDAGSMFFLGEI
YVDMALPESEPVTAHCGSCSACIDVCPTQAIVAPRRLDARRCISYLTIEHGGPIPEELRP
LMANRIYGCDDCQLICPWNKFAKKSALPDFDAREGLTGRTLAELFAWTEDDFLRRTEGSP
IRRIGHERWLRNIAVALGNAVRAGEGGAKEALATRASHPSELVREHVAWGLAQDATASP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcagccatccactcgttgttcgtattcaggctttggcccgggaactcggattc
tcccaaatcggaatcgcgggcgtcgatttatcgagcgccgaggacggtctgatgcaatgg
ctggcccatgggttccatggcgagatgcaatacatggaaacgcacggcacccgccgcgcg
cgtcccgccgagctggtgccgggcacggtgagcgtgatcaccgcgcgcatggactacctg
ccgcgcgacacgccgcccgagtggcaagcgatcgagttcgaccgcctcgcgcggcccggc
gaggccatcgtgtcggtctatgcgcggggccgcgactatcacaaggtgctgcgcaatcgc
ctcgcgaaactggccgagaagatcgccgaggaggtcggcccgttcggccaccgcgccttc
accgattcggcgccggtgctcgaagccgagctcgcatcgcgcagcggccaaggctggcgc
ggcaagcacacgctggtgctcgaccgcgacgcgggctcgatgttctttctcggcgagatc
tatgtcgatatggcgctgcccgagagcgagcccgtcaccgcgcattgcggcagctgcagt
gcctgcatcgacgtgtgcccgacgcaggccatcgtcgcgccgcggcggctcgatgcgcgg
cgctgcatctcgtacctcaccatcgaacacggcgggcccatcccggaggaactgcggccc
ttgatggccaaccgcatctacggctgcgacgactgccagttgatctgcccctggaacaaa
tttgcgaagaagagcgcgctgccggatttcgacgcgcgcgaagggctcacgggccgcaca
ctggccgagctcttcgcgtggaccgaggacgactttcttcgccgcaccgagggcagcccg
atacgccgcatcgggcatgagcgatggctgcgcaacatagcagtggcgcttggcaatgcg
gtgagagcgggcgagggaggcgcgaaggaggcgctggcgacgcgcgcctcgcacccgagc
gaactggtgcgcgagcatgtcgcatgggggcttgcacaggacgcgacggcatcgccgtga
DBGET
integrated database retrieval system
