Variovorax paradoxus EPS: Varpa_3976
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Entry
Varpa_3976 CDS
T01392
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Varpa_3976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_3976
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
Varpa_3976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ADU38148
UniProt:
E6V429
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All DBs
Position
4286940..4288835
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AA seq
631 aa
AA seq
DB search
MSALPSSISPSPRRPIRELPDELISQIAAGEVVERPASVVRELLDNALDAGASQVTVRLA
SGGVRLISVEDDGLGIPREELTVALRRHATSKIASLDDLETVGTMGFRGEALAAINAIAE
LSILSRFGGADSAFALDGRTGELRPVARSVGTTVEVRELFFATPARRKFLKTDATELAHC
IEAVRRHALARPEVGFSVWHDGKLVEQWRAADAREQRLADALSDDFVAKSVAVEHLGGVV
RVVGRAGIPDAARSRGDQQFFYVNGRFVRDKVLSHAVRSAYEDVLHGQRQPIYALYLEID
PSRVDVNVHPTKIEVRFRDGREVHQAVRHAIEDALAAPRAGDAVAPSGPPEPFFRETKLP
ESASWSQPAMNFVARERGAGDFEAMWPRRTDELGHAPDSTPSHWPLTGAAPMAFRAPVGL
PPSPAEDASAPAATNDEAWPLGRALAQLQGIYILAENTQGLVVVDMHAAHERIVYERLKT
QLDGAAITSQPLLIPATFAATPQEVATAEACAEVLPTLGLEITAFSARTLAVRAVPGTLA
DGDPVELARSVLAELGQHDASTVVQRAQNELLSTMACHGAVRANRKLTIDEMNALLRQME
ATERSDQCNHGRPTWRQLSIRELDTLFMRGR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcactaccctcctccatttccccctctccccgccgcccaatccgcgagctcccc
gacgagctgatcagccagattgccgccggcgaagtggtcgagcggccggcctcggtggtg
cgcgaactgctcgacaacgccctggatgcgggcgcgagccaggtcacggtgcggctcgcc
tcgggcggcgtgcggttgatctcggtggaagacgacgggctgggtattccgcgcgaagaa
ctcacggtggcgctgcgccgccatgccaccagcaagatcgcgagcctggacgacctggag
acggtcggcaccatgggctttcgcggcgaggcgctcgcggcgatcaatgcgattgccgaa
ctcagcatcctctcgcgcttcggcggcgccgacagcgccttcgcgctcgatggccgcacc
ggcgagctgcgcccggtggcgcgctctgtaggcaccaccgtcgaagtgcgcgaactcttc
ttcgcaacgcccgcacgccgcaaattcctcaagaccgatgccaccgagctggcccactgc
atcgaggccgtgcgccgccatgcgctggcgcggcccgaggtcggcttttcggtgtggcac
gacggcaagctggtcgagcaatggcgcgccgccgacgcgcgcgaacagcggctggccgat
gcgctcagcgatgacttcgtggccaagagcgtggccgtcgaacacctgggcggcgtggtg
cgcgtggtcggccgtgccggtattcccgatgcggcgcgctctcgaggcgaccagcagttc
ttctacgtcaacggccgcttcgtgcgcgacaaggtgctctcgcacgcggtgcgcagcgcc
tatgaagacgtgctgcacgggcagcgccagccgatctatgcgctgtaccttgaaatcgat
ccgtcgcgcgtcgacgtgaacgtgcacccgaccaagatcgaggtgcgttttcgcgatggc
cgcgaggtgcaccaggcggtgcgccacgccatcgaggacgcgctggccgcgccgcgcgcc
ggggatgccgtggcgccgtccggtccgccggaaccctttttcagggagaccaagctgccc
gagagcgcgagctggtcgcagccggccatgaatttcgtggcgcgggagcgcggtgccggc
gatttcgaggccatgtggccgcgccgtaccgacgaactcgggcacgcgcccgattccaca
ccctcgcactggccactgaccggtgcggcaccgatggccttcagggcgcccgtcgggctg
cctccgagccccgcggaagacgcctcggcacccgccgccaccaacgacgaggcctggccc
ctcggccgcgcgctggcccagttgcagggcatctacatcctggccgagaacacccaggga
ctggtggtggtcgacatgcatgcggcgcacgagcgcatcgtctacgagcggctcaagacg
cagctcgacggcgccgccatcaccagccagccgctgctgattcccgcgaccttcgcggcc
acgccgcaggaagtggccacggccgaggcctgtgccgaggtgttgccgacgctgggactg
gaaatcaccgcgttttcggcacgcacgctcgcggtgcgcgcagtgcccggcacgctggcg
gatggcgacccggtcgagctcgcgcgcagcgttctggccgaactgggccagcacgacgcc
agcaccgtggtgcagcgcgcccagaacgaattgctgtccaccatggcctgccacggcgcg
gtgcgggccaaccgcaagctcaccatcgacgagatgaacgcactgttacgccagatggaa
gcgaccgagcgttcggaccagtgcaaccacggcaggccgacttggcgccagctgtcgatt
cgcgagctcgacacgctgttcatgcgcggcagatag
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