Variovorax paradoxus EPS: Varpa_4000
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Entry
Varpa_4000 CDS
T01392
Name
(GenBank) extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_4000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_4000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4000
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_4000
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SSDB
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Paralog
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GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ADU38172
UniProt:
E6V4Z1
LinkDB
All DBs
Position
complement(4315823..4317019)
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AA seq
398 aa
AA seq
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MNKKLGLIATAVAVLAMGAGAAQAQEKVKIGFVTDLSSLYADLEGKGGATAIQMAIDDFG
GKVLGQPIELLVADHQNKADIAASKAREWVDTAGVTMIFGGTNSGTALATAKVAEEKKRV
YFNNGAGSSVLTNEQCSPYTVHYAYDTVALAKGTGAAVVDRGGKSWFFLTADYAFGHALE
SDTTKVVKEKGGTVVGAVRHPLNASDFSSFLLQAQNSKAQILGLANAGGDTINAIKASKE
FGINKTMKTAGLLVFLSDIHSLGLKNTEGLLHTTSWYWDLNDDTRKFANRFFEKTKRMPT
DVQAADYSATTTYLKAVAAAKTTDSDKVMAQLKSMKIDDFYGKGQIRADGSFIHDMYLVE
AKSPAESKKPWDYLKVLKVLPGDQVFTTKAETKCAAWK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaactcggcctcatcgccaccgccgtcgctgtcctcgccatgggcgcgggc
gccgcacaggctcaagagaaagtgaagatcggcttcgtcaccgacctgtcgagcctgtac
gccgacctcgaaggcaagggcggcgccaccgccatccagatggccatcgacgacttcggc
ggcaaggtgctgggccagcccatcgaactgctggttgcagaccaccagaacaaggccgac
atcgccgcctccaaggcccgcgagtgggtcgacaccgccggcgtgaccatgatcttcggc
ggcaccaattcgggcaccgcgctcgcgaccgccaaggtggccgaagagaagaagcgcgtg
tacttcaacaacggcgccggcagctcggtgctcaccaacgagcagtgctcgccctacacc
gtgcactacgcctacgacaccgtggcgctggccaagggcaccggcgcggcggtcgtggac
cgtggcggcaagagctggttcttcctgaccgccgactacgccttcggccacgcactcgaa
tccgacaccaccaaggtggtgaaggaaaagggcggcacggtggtgggcgcggtgcgccat
ccgctgaacgcatcggacttctcctctttcctgctgcaggcgcagaactccaaggcgcag
atcctgggcctggcgaacgcgggcggcgacaccatcaacgcgatcaaggcgtcgaaggaa
ttcggcatcaacaagaccatgaagaccgcgggcctgctggtctttttgagcgacatccac
agcctgggcctgaagaacaccgaaggcctgctgcacaccaccagctggtactgggacctg
aacgacgacacgcgcaagttcgccaaccgcttcttcgagaagaccaagcgcatgcccacc
gacgtgcaggccgccgactactcggccaccaccacctacctgaaggccgtggcggccgcc
aagaccaccgattccgacaaggtgatggcgcagctcaagagcatgaagatcgacgacttc
tacggcaagggccagatccgcgccgacggcagcttcatccacgacatgtaccttgtcgaa
gcgaagtcgcccgccgaatcgaagaagccgtgggactacctgaaggtgctgaaggtgctg
ccgggtgaccaggtcttcaccacgaaggccgaaacgaaatgcgccgcctggaaataa
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