Variovorax paradoxus EPS: Varpa_4002
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Entry
Varpa_4002 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_4002
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_4002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4002
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_4002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_22
SMC_N
AAA_29
AAA_15
AAA_30
AAA_23
AAA_27
SRP54
RsgA_GTPase
AAA_16
AAA
DUF1155
Motif
Other DBs
NCBI-ProteinID:
ADU38174
UniProt:
E6V4Z3
LinkDB
All DBs
Position
complement(4317775..4318545)
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AA seq
256 aa
AA seq
DB search
MSDVILETRQLTKEFKGFTAVSKVNLSVVRGSIHALIGPNGAGKTTCFNLLTKFLEPTTG
TILFNGQDITGERPAQIARRGIIRSFQISAVFPHLTLLENVRLGLQRRLGTSYHFWKSEK
SLKPLDARARELLAEVGLEELADEQTVNLPYGRKRALEIATTLAMEPELMLLDEPTQGMG
HEDVHRVAELIKRVSAGRTILMVEHNMSVVSTIADTITVLQRGAVLAEGPYAEVSKNPQV
MEAYMGTTDGEMQGAH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcatcctcgaaacacgccagctcaccaaggaattcaaggggttcaccgcg
gtcagcaaggtcaacctctcggtggtgcgcggctcgatccacgcactcatcggccccaac
ggtgccggcaagaccacctgcttcaacctgctcacgaaattcctggaaccgaccacgggc
acgatcctgttcaacgggcaggacatcaccggcgaacgccccgcgcagatcgcacggcgc
ggcatcatccgctcgttccagatatcggccgtgttcccgcacctgacgttgctggagaac
gtgcgcctcggcctgcagcggcgcctgggcacctcgtaccacttctggaagagcgagaaa
tcgctcaagcctctggatgccagagcccgcgagctgctggctgaagtcggcctggaggaa
ctggccgacgaacagaccgtgaacctgccttacggccgcaagcgggcgctcgagatcgcc
accacgctggcgatggaacccgagctcatgctgctcgatgagcccacccaaggcatgggc
cacgaagacgtgcaccgcgtggccgagctcatcaagcgcgtgtcggccggacgcaccatc
ctgatggtcgaacacaacatgagcgtggtctccacgattgccgacaccatcaccgtgctg
caacgcggcgccgtactggccgaaggcccctacgccgaagtctcgaagaacccgcaggtg
atggaggcctacatgggcacgacggacggcgaaatgcagggggctcactga
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