Variovorax paradoxus EPS: Varpa_4005
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Entry
Varpa_4005 CDS
T01392
Name
(GenBank) secretion protein HlyD family protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4005
Transporters [BR:
vpe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Varpa_4005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
DUF826
DUF5701
OEP
Iml2-TPR_39
Motif
Other DBs
NCBI-ProteinID:
ADU38177
UniProt:
E6V4Z6
LinkDB
All DBs
Position
complement(4321643..4322992)
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AA seq
449 aa
AA seq
DB search
MSDNNTPTSAASAAPVAPEAPAGNGKRRRALTALAAVVIVAGGGWGLYEWLVASHYEDTD
NAYVQGNVIQITPQIGGTVMAINADDTDFVKAGQPLVQLDPADAKVSLEQAEAALAQTVR
QTRTLYANNGSLAAQVTLRQSDIVKAQSDIAKAQDDLQRRRALSGNGAVSKEELNHAETQ
LDTAKSQLAAAQAGVVAAKEALVSNQSLTEGTSVAQHPSVLAAAAKVREAYLATQRVAMP
APVDGYVAKRTVQLGQRVAAGTPMMSIVPLNQLWVDANFKEVQLRNIRIGQPVKLTADVY
GKKVEYDGKVAGLGVGTGSAFALLPAQNATGNWIKVVQRVPVRIALDAEQLKANPLRIGL
SMDAEIDITSKSGKMLADAPRGTALTQTQVYSQLDRGADAEVDRIVAANLGRSASANAAN
AAGATSAPAKHPSATPGTGAQVAVQGQPG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacaacactccgacgtccgctgcttccgcagcccctgttgcacccgaagcg
cccgccggcaacggcaagcgccgccgcgcgctgaccgcattggcagccgtggtgatcgtc
gccggcggcggctggggtctctacgaatggctggtcgccagccattacgaagacaccgac
aacgcctacgtgcagggcaacgtcatccagatcacgccgcagatcggcggcaccgtcatg
gccatcaacgccgacgacaccgacttcgtgaaggccggccagccgctggtgcagctcgac
ccggccgatgccaaggtctcgctcgaacaggccgaggccgcgctggcccagaccgtgcgc
cagacgcgcacgctctacgccaacaacggttcgctggccgcgcaggtcacgctgcgccag
tcggacatcgtcaaggcccagagcgacatcgccaaggcccaggacgacctgcaacgtcgc
cgcgcgctctcgggcaacggcgcggtgtcgaaggaagaactgaaccacgccgaaacgcag
ctcgacacggccaagagccagctcgccgccgcgcaggccggcgttgtcgccgccaaggaa
gcgctggtgagcaaccagtcgctgaccgaagggaccagcgttgcgcagcaccccagcgtg
ctggccgccgccgccaaggtgcgcgaggcctacctcgccacgcagcgcgtcgcgatgccc
gcgcccgtcgacggctacgtcgccaagcgcaccgtgcagctcggccagcgtgtggccgcc
ggcacgccgatgatgtcgatcgtgccgctcaaccagctgtgggtcgatgccaacttcaag
gaagtgcagctgcgcaacatccgcatcggccagcccgtgaagctcacggccgacgtctac
ggcaagaaggtcgagtacgacggcaaggtcgccggcctcggtgtgggcaccggcagcgcg
tttgcgctgctgcccgcgcagaacgccaccggcaactggatcaaggtggtgcagcgcgtg
cccgtgcgcatcgcgctcgacgccgagcagctcaaggccaacccgctgcgcatcggcctg
tcgatggatgccgagatcgacatcacgtccaagagcggcaagatgctcgccgacgcgccg
cgcggcaccgcgctcacgcagacgcaggtctacagccagctcgaccgcggcgccgatgcc
gaagtggaccgcatcgtcgcggccaacctcggccgcagcgcttcggccaatgccgcgaac
gctgcgggcgccacgagcgcgcccgcgaagcatccgtccgcgacgccgggtaccggcgcg
caggtggccgtgcagggccagcccggttga
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