Variovorax paradoxus EPS: Varpa_4033
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Entry
Varpa_4033 CDS
T01392
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_4033
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_4033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4033
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_4033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TetR_C_30
LYRM2-like
Gcn1_N
Motif
Other DBs
NCBI-ProteinID:
ADU38205
UniProt:
E6V524
LinkDB
All DBs
Position
complement(4350533..4351825)
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AA seq
430 aa
AA seq
DB search
MTPPFIWRRQALKFAALALCASPFAALAQTSSVPPAPIRLALIESMSGPFANTGEAVFRN
LLWAVERVNARGGVKLPGGARPLQLDRYDSKGQNEEALSALRAAMDDGARIVLQGNSSAT
AAALVDAIDKNNERDPARRVIFLNYAAVDPVLTNERCSFWHFRFDAHADMRVAALMDVVK
DDAALKRAYLIGQDYSFGQSVLREVRRQLGVQRPDVEIVGDELHPMGKVKDFAPYATKIL
ASGAQAVFTGNWGNDLTLLVKAAREAGFNGSFYTFYGNALGAPAAIGDAGIGRVVAVADW
LPNVQTAQSEAFYRAFRARFPKPADDYVHMRMQLLVESLAQAVERAGSVDAVAVARALEQ
ADVSLYGQRGRMRAADHQFQQQLVVGVMDRQGKPGVQFDVEGSGYGFRVIKTIAPERAEL
PTSCKMKRPS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgactcccccctttatttggcgccgccaggccttgaaattcgcggcgctggcgctatgc
gcgagccccttcgccgcgcttgcgcaaacctcgtccgtaccgcccgcgcccatccgcctt
gcgttgatcgagagcatgagcgggcccttcgcgaacacgggcgaagcggtgttccgcaac
ctgctgtgggctgtggagcgggtcaacgcgcgcggcggcgtgaagctgcccggcggtgcg
cgtccgctgcagctggaccgctacgacagcaagggccagaacgaggaagcgctctccgca
ttgcgcgcggccatggacgacggtgcgcgcatcgtcctgcagggcaactcgtcggccacc
gccgcggcgctggtcgatgccatcgacaagaacaacgagcgcgacccggcaaggcgcgtg
atcttcctgaactacgcggcggtcgatccggtactcaccaacgagcgctgcagcttctgg
cactttcgcttcgacgcgcacgccgacatgcgcgtggccgcgctgatggacgtggtgaag
gacgacgccgcgctcaagcgcgcctacctgatcgggcaggactacagcttcggccaatcg
gtgctgcgcgaggtgcgccggcagctcggcgtgcagcggcccgatgtggaaatcgtcggc
gacgaactgcacccgatgggcaaggtgaaggacttcgcgccctacgccaccaagatcctc
gcgagcggcgcgcaggcggtgttcaccggcaactggggcaacgacctcacgctgctcgtg
aaggcggcacgcgaggccgggttcaatggcagcttctataccttctacggcaacgcgctg
ggcgcgccggcggccatcggcgatgcaggcatcggccgtgtggtggccgtggccgactgg
ctgccgaacgtgcagaccgcgcagtcggaggcgttctaccgcgcgttccgtgcgcgcttt
ccgaagcccgcggacgactatgtgcacatgcggatgcaactgctggtcgaatcgctcgcg
caggccgtcgagcgcgccggaagcgtcgatgccgtggcggtggcgcgcgcgctggagcag
gccgacgtgagcctgtacggccagcgcggccgcatgcgcgcggcggaccaccagttccag
cagcagctcgtggtcggcgtgatggaccggcagggcaagcccggcgtgcagttcgatgtc
gagggctcgggctatggcttccgcgtgatcaagacgatcgccccggagcgcgccgaactg
ccgacttcgtgcaagatgaaacgaccctcatga
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