Variovorax paradoxus EPS: Varpa_4038
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Entry
Varpa_4038 CDS
T01392
Name
(GenBank) nitrate ABC transporter, inner membrane subunit
KO
K15577
nitrate/nitrite transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00910
Nitrogen metabolism
vpe02010
ABC transporters
Module
vpe_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Varpa_4038
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_4038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4038
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Nitrate/nitrite transporter
Varpa_4038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADU38210
UniProt:
E6V529
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All DBs
Position
4356437..4357375
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AA seq
312 aa
AA seq
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MVSAVFHSPMDASLPLPRAGEGRGEGVPRIEAAPHPNPFPKGEREQKQRTPIDLRAFWMR
VLPPLAGFGLLLLIWELVAMKSTTGFPTPLATWQQALTVFSDPFYSKGPNDQGVGWNVLS
SLQRVALGFGLAALVGIPAGFAIGRFEFLARMFNPLISLMRPVSPLAWLPIGLLVFKGAN
PAAIWTIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKILTKILFPAVLPYMLTG
VRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVANIIIAIFVIGIVGLVLEFALIK
LATAFTFEEVKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgctgtatttcattcgccgatggacgcatctctccctctcccgcgtgcggga
gagggccggggtgagggcgtgccccgtattgaggctgcccctcaccccaaccctttcccc
aaaggggagagggagcaaaaacaacgcacgcccatcgacctgcgcgccttctggatgcgc
gtgctgccgccgctcgcaggcttcggcctgctgctcttgatctgggagctggtcgccatg
aagagcaccaccggctttcccacaccgctcgccacctggcagcaggcgctgacggtgttc
agcgatccgttctacagcaagggcccgaacgaccagggcgtgggctggaacgtgctctcg
tcgctgcagcgcgtggcgctgggcttcggcctcgcggcgctggtcggcattccggcgggc
ttcgctatcggacgcttcgagttcctcgcgcgcatgttcaatccgctcatcagcctgatg
cgcccggtgtcgccgctcgcgtggctgcccattggcctcctggtgttcaagggcgcgaac
ccggcggctatctggaccatcttcatctgctcgatctggccgatggtcatcaacaccgcc
gtgggcgtgcagcgcgtgccgagcgactacatgaacgtggcgaaggtgctcaatctttcc
gaatggaagatcctcaccaagatcctcttccccgccgtgttgccctacatgctcaccggc
gtgcgcctcgcggtcggcaccgcatggctcgtgatcgtcgcggccgagatgctgaccggc
ggcgtcggcatcggcttctgggtgtgggacgagtggaacaacctcaacgtcgccaacatc
atcatcgcgatcttcgtgatcggcatcgtcgggctggtgctggagttcgcgctcatcaag
ctggccactgcgttcacgttcgaagaggtgaagtcatga
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