KEGG   Variovorax paradoxus EPS: Varpa_4050
Entry
Varpa_4050        CDS       T01392                                 
Name
(GenBank) ABC transporter related protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_4050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_4050
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    Varpa_4050
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 Rad17 RsgA_GTPase AAA_22 AAA_25 AAA_16 AAA AAA_28 AAA_17 AAA_29 nSTAND3
Other DBs
NCBI-ProteinID: ADU38222
UniProt: E6V541
LinkDB
Position
4372348..4373373
AA seq 341 aa
MNAVAPLPPAAVEIVALSKRYAPGTPAAVDAIDLRIASGSYCCLLGPSGCGKSTTLRMIA
GHESVTSGDILLDNRNITNLPAAARGTAMMFQSFALFPHLSATDNVAFSLKMKGVGKAER
QKRARDLLARVAMGHLAERKPGELSGGQQQRVALARALITEPRVLLLDEPLSALDPFLRI
QMRAELRRWQKELGLTFVHVTHSQEEAMALADTMVVMNHGVIEQVGSPHEIYNHPANEFV
ARFMGGHNVIDTLAGPIAVRNDHMRIAANSQADGLAAAITDVEYQGTYVLLGLVLEAAAP
ERRNVSVLLGEAAFLASPYAQGETVRLSWAEADARALAVAP
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgaacgccgtcgccccgctcccgcccgccgcggtcgagatcgtcgcgctcagcaagcgc
tacgcccccggcacgccggccgccgtcgacgccatcgatctgcgcatcgccagcggcagt
tattgctgcctgctggggccctcaggctgcggcaagagcaccacgctgcgcatgatcgcg
gggcatgaatcggtcaccagcggcgacatcctcctggacaaccgcaacatcaccaacctg
cccgccgccgcgcgcggcacggcgatgatgttccagagcttcgcgctgttcccgcacctc
tcggccaccgacaacgtggctttcagcctcaagatgaaaggcgtcggcaaggccgagcgc
cagaagcgtgcgcgcgacctgctggcgcgcgtcgcgatgggccacttggccgagcgcaag
ccgggcgagctctccggcggccagcagcagcgcgtggcgctggcgcgcgcgctcatcacc
gagccgcgcgtgctgctgctcgatgaaccgctgtcggcgctggacccgttcctgcgcatc
cagatgcgcgccgaactgcggcgctggcagaaggaactgggcctgaccttcgtgcacgtg
acgcactcgcaggaagaagccatggcgctggccgacacgatggtggtgatgaaccacggc
gtgatcgagcaggtcggctcgccgcacgagatctacaaccaccccgccaacgaattcgtg
gcgcgcttcatgggcggccacaacgtgatcgacacgctcgccgggccgattgcggtgcgc
aacgaccacatgcggatcgccgcgaactcgcaggccgatggcctggccgccgcgatcacc
gacgtcgaataccagggcacctacgtgctgctcggcctggtgttggaagccgccgcgccg
gagcgccgcaacgtgtcggtgctgctgggcgaagccgcctttctcgcgagcccctacgcg
caaggcgagacggttcgcctgtcgtgggccgaagccgacgcgcgcgcgctcgccgtggcg
ccgtag

DBGET integrated database retrieval system