KEGG   Variovorax paradoxus EPS: Varpa_4051
Entry
Varpa_4051        CDS       T01392                                 
Name
(GenBank) twin-arginine translocation pathway signal
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_4051
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_4051
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    Varpa_4051
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_11
Other DBs
NCBI-ProteinID: ADU38223
UniProt: E6V542
LinkDB
Position
4373438..4374706
AA seq 422 aa
MTEPIDSSAGVKRRALLQGTAGILATGIAPFVHAQEKIVLRYLGTAVNQDKAIAEKFKAD
TGIEIQYVAVTTDDVTKRAVTAPNSFDLIDTEFFSLKKIVPTGNLKGIDTNRVKNAAKIT
SLFTKGEVGGKKVGDQGTAPIKVIYLEGEKSKAFAKSPSQFMSLIPTTYNADTLGIRPDL
IKRPIGSWAELLNPEFKGKAAILNIPSIGIMDAAMVVEAKGIHKYADKGNMTKAEIDLTI
KTLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRGKGIDCTFQPLKEGY
RAWASGFGLPATLSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLDTAKTKMEAYEWA
YWMEGKPAAQDIKSPQGDVIAKAGAVRDGGSYEQRMGGIACWNAVMDENEYMVRKWNEFV
AA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaccgaacccatcgactcgtccgccggcgtcaagcgccgcgccctgctgcaaggcacc
gccggcatcctggccacgggcatcgcgcccttcgtgcatgcacaggaaaagatcgtgctg
cgctacttgggcaccgcggtgaaccaggacaaggcgatcgccgagaagttcaaggccgac
accggcatcgagatccagtacgtggccgtgaccaccgacgacgtgaccaaacgcgcggtg
accgcgcccaacagcttcgacctgatcgacaccgagttcttctcgctcaagaagatcgtg
ccgaccggcaacctgaaaggcatcgacaccaatcgcgtgaaaaacgccgccaagatcacc
tcgctcttcaccaagggcgaagtgggcggcaagaaggtcggcgaccagggcacggcgccc
atcaaggtgatttacctcgaaggcgagaagagcaaggcgttcgcgaagtcgccgtcgcag
ttcatgtcgctgattccgaccacctacaacgccgacacgctgggcattcgccccgacctc
atcaagcgcccgatcggctcgtgggccgagttgctgaaccccgagttcaagggcaaggcc
gccatcctgaacattccctcgatcggcatcatggacgccgcgatggtggtggaggccaag
ggcatacacaagtacgccgacaagggcaacatgaccaaggccgagatcgacctcacgatc
aagaccttgatcgaggccaaaaaggccggccagttccgcgcgctgtggaaggacttcaac
gagtcggtcaacctcatggcttcgggcgaagtggtgatccagtcgatgtggtcgccggcc
gtcaccgcggtgcgcggcaagggcatcgactgcaccttccagcccctgaaggaaggctat
cgcgcctgggcctcgggcttcggcctgccggccacgctctcgggcaagaagctcgacggc
gcgtacgagttcatcaactggttcctcgacggctgggccggcgcgtacctcaatcgccag
ggctactacagcgccgtgctggacaccgccaagaccaagatggaagcctacgagtgggcc
tactggatggaaggcaagcccgccgcgcaggacatcaagagcccgcaaggcgacgtgatc
gccaaggccggcgcggtgcgcgacggcggcagctacgagcagcgcatgggcggcatcgcc
tgctggaacgcggtgatggacgagaacgagtacatggtgcgcaagtggaacgagttcgtc
gcggcctga

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