Variovorax paradoxus EPS: Varpa_4078
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Entry
Varpa_4078 CDS
T01392
Name
(GenBank) heavy metal efflux pump, CzcA family
KO
K15726
heavy metal efflux system protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4078
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_4078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
ADU38250
UniProt:
E6V615
LinkDB
All DBs
Position
complement(4399024..4402215)
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AA seq
1063 aa
AA seq
DB search
MFERIIGFSIAQRWLVLLAVLGMAALGVFSYQKLPIDAVPDITNVQVQINTSAPGYSPLE
AEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFEDGTDIYFARQLVNERIQSARES
MPSGISPVIGPISTGLGEIYLWTVEAEEGAKKPDGKPYTPTDLREIQDWIIKPQLRNVKG
VTEINSIGGYDKEYQIAPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIRA
PGQVKSVEDIGNVILGNAGGIPLRVQDVAEVGIGQELRTGAATDNGREVVLGTVFMLIGE
NSRTVSQAVDKKMQEVNRTLPAGVKAVTVYDRTVLVDKAIATVKKNLFEGAVLVIAILFL
FLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLGALDFGIIIDGAVVIVENCVRR
LAHAQAKHGRPLTRSERFHEVFAASQEARRPLLFGQLIIMIVYLPIFALTGVEGKLFHPM
AFTVVIALVGAMILSITFIPAAVALFIGNKVSEKENRLMTWAKRGYEPLLARVMTAKPLV
ITVAAVAVVLSGLLATRLGTEFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQLERTLKAK
FPEIERVFARTGTAEIASDPMPPNISDGYIMLKPESEWPAPKRTRSELLTAVQEEVEKLP
GNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDVAVLDKTAAEVSKVLTGISGAAEVKVE
QTTGLPMLTVNIDRQKTARYGLNVGDVQDAISIAVGGREAGTLFDGDRRFDILVRLPENL
RTDLEAIKRLPVALPKGAGAEGLRTSFIPLGEVATLELAPGPNQVSRENGKRRIVVSANV
RGRDLGSFVAEAEAAMRQVTIPTGYWTVWGGQYENLASATQRLQVVVPVSLLLVFTLLFA
MFGNLKDGLLVFTGIPFALTGGIVALWLRDIPLSISAAVGFIALSGVAVLNGLVMISFIR
NLREGGLPLDEAIREGALTRLRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGI
LSSTALTLLVLPLLYRIAHRRDEDKALEEARRREARPMSMELP
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacgcatcatcggcttctccattgcgcagcgctggctcgtgctgctcgccgtg
ctcggcatggccgcgctcggcgtcttcagctaccagaagctgcccatcgacgcggtgccc
gacatcaccaacgtgcaggtgcagatcaacacctccgcgcccggctactcgccgctcgaa
gccgagcagcgcgtgacctatcccatcgagacggtgatggcgggcctgccgggcctgcag
cagacccgctcgctctcgcgctacggcctctcgcaggtgacggtgatcttcgaggacggc
accgacatctacttcgcgcggcagctggtgaacgagcgcatccagtcggcgcgcgagagc
atgcccagcggcatctcgccggtgatcggaccgatctccacgggcctgggcgaaatctat
ctctggacggtggaagcagaagagggcgcgaagaagcccgacggcaagccctatacgccc
acggacctgcgcgagattcaggactggatcatcaagccgcaactgcgcaacgtgaagggc
gtgaccgagatcaattccatcggcggctacgacaaggagtaccagatcgcgcccgacccc
gcgaagctcctggcgcacggcctcacgatgaccgacctggtcaccgcgctggagcgcaac
aacgccaacgtgggcgcgggctacatcgagaagcgcggcgagcagtacctcattcgcgcg
ccgggccaggtgaagtcggtggaagacatcggcaacgtgatcctgggtaatgcaggcggc
attccgctgcgggtgcaggacgtggccgaggtcggcatcggccaggaactgcgcacgggc
gccgccaccgacaacggccgcgaggtggtgctgggcaccgtcttcatgctgatcggcgag
aacagccgtaccgtgtcgcaggccgtcgacaagaagatgcaggaggtcaaccgcacgctg
cccgcgggcgtgaaggcggtgacggtgtacgaccgcacggtgctggtcgacaaggccatc
gcgacggtgaagaagaacctcttcgagggcgcggtgctggtgatcgcgatcctgttcctc
tttctcggcaacatccgcgcggcgctcatcaccgcgctggtgattccgctgtcgatgctc
ttcaccttcaccggcatggtgaaccagaaggtcagcgccaacctcatgagcctgggcgcg
ctggacttcgggatcatcatcgacggggcggtggtgatcgtggagaactgcgtgcgaagg
ctcgcgcatgcgcaggccaagcatgggcggccgttgacgcgcagcgagcgctttcatgaa
gtgttcgccgcctcgcaggaggcgcggcgcccgctgctgttcggacagctcatcatcatg
atcgtgtacctgccgatctttgcgctcacgggcgtggagggaaagctcttccatccgatg
gccttcaccgtggtgatcgcgctggtgggcgcgatgatcttgtcgatcactttcattccc
gcggccgtggcgctcttcatcggcaacaaggtcagcgagaaggagaaccggctgatgacg
tgggccaagcgcggctacgagccgctgctcgcgcgcgtgatgacggccaagccgctggtg
atcacggtggctgcggtggcggtggtgctctcgggtctgctggcgacgcggctgggcacc
gagttcgtgccgagcctcagcgaaggcgacttcgcgatccaggcgctgcgcattccgggc
accagcctcacgcagtcggtcgagatgcagaagcagctcgaacgcacgctgaaggcgaaa
ttcccggagatcgagcgcgtgttcgcgcgcaccggcacggccgagattgcatcggacccg
atgccgccgaacatctccgacggctacatcatgttgaagcccgagagcgagtggcctgca
ccgaagcgcacgcgctcggaactgctgacggcggtgcaggaagaggtcgagaagctgccg
ggcaacaactacgagttctcgcagccgatccagttgcgcttcaacgaattgatttccggc
gtgcgcagcgacgtggcggtgaagatcttcggcgacgacgtggcggtgctcgacaagacg
gccgctgaagtgtcgaaggtgctcaccggcatctccggcgcggcagaggtgaaggtcgag
cagaccacgggcctgccgatgctcacggtgaacatcgaccgccagaagaccgcgcgctac
ggcctcaacgtgggcgacgtgcaggacgcgatttccatcgcggtcggcggccgagaggcg
ggcacgctgttcgacggcgaccggcgcttcgacatcctggtgcgcctgccagagaacctg
cgcaccgacctggaggcgatcaagcggctgccggtcgcgctgcccaagggcgcgggcgcc
gagggattgcgcaccagcttcatcccgctcggcgaagtcgccacgctggaactcgcgccg
ggccccaaccaggtgagccgcgagaacggcaagcgccgcatcgtggtgagcgccaacgtg
cgcggccgcgacctcggctccttcgtggccgaggccgaagcggcgatgcgccaggtgacc
attcccaccggctactggaccgtgtggggcggccagtacgagaacctcgcctcggccacg
cagcggctgcaggtggtggtgccggtgtcgctgctgctggtgttcacgctgctgttcgcg
atgttcggcaacctgaaggacggcctcttggtgttcaccggcatcccgttcgcgctcacc
ggcggcatcgtggcgctgtggctgcgcgacattccgctgtcgatctcggcggcggtgggt
ttcatcgcgctctcgggcgtggcggtgctcaacgggctggtgatgatctcgttcatccgc
aacctgcgcgagggcgggctgccgctggacgaggccatccgcgaaggcgcgctcacccgg
ctgcggccggtgctgatgacggcgctggtcgcgtcgctgggcttcgtgccgatggccatt
gccaccggcaccggcgccgaggtgcagcggccgctggcgacggtggtgatcggcggtatc
ctttcttcgaccgcgctgacgctgctggtgcttccgctgctctatcgcattgcccaccgg
cgcgatgaggacaaagcgttagaggaggcccgcaggcgcgaggcccgacccatgtcgatg
gagctgccctag
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