Variovorax paradoxus EPS: Varpa_4079
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Entry
Varpa_4079 CDS
T01392
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K15727
membrane fusion protein, heavy metal efflux system
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4079
Transporters [BR:
vpe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Varpa_4079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
OEP
DUF2946
Motif
Other DBs
NCBI-ProteinID:
ADU38251
UniProt:
E6V616
LinkDB
All DBs
Position
complement(4402225..4403589)
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AA seq
454 aa
AA seq
DB search
MNTQEERKTLTERTSKKQWMAVVAILVLGFAAGALILRTDPAKPQAAGHSEAGGHADGEH
HEEGKAEGKDHGHDHGHEEAKGHGDKEHHGEESKEKGAPAEAKAESKEHKEDEEKIPFTD
EQVKAAGMAIESAGPARIKTSLQLPGEIKFNEDRTAHVVPRVAGVVDSVSANLGQEVKRG
QVLAVLSSPGLSEQRSALQSAQRRLELARTTYEREKKLWEEKISPQQDYLQAQQAMQEAQ
IAVANANQKLLALGATPGSAALGRYELRAPFDGMVVEKHISLGESVGEAVNVFTISDLST
VWAEISVAANNLNLVRIGEPVTIRSSAFDQTASGTVSYVGSLIGAQTRTATARVTLTNPQ
RVWRPGLFVNVELVSSEADAPVTVAAEAVQTVEEKPTVFLKVPGGFMPQHVQTGRSDGKR
IEIVGGLKPGAAYAASGSFVIKSQQGKSSATHTH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcaagaagaacgcaagactctcaccgagcgcaccagcaagaagcagtggatg
gccgtcgtggccatcctggtcctgggcttcgcggcgggggcgctgatcctgcgcaccgac
ccggccaagccccaggcggccggccattcggaggccggcggccatgccgacggcgagcac
cacgaggaagggaaagccgagggcaaggaccatggccacgaccacggccatgaagaagcc
aagggtcatggcgacaaggagcaccacggcgaggaatccaaggagaagggcgctcccgct
gaagcgaaagctgaatcgaaggagcacaaggaggacgaagaaaagatccccttcaccgac
gagcaggtgaaggcggccggcatggccatcgaaagcgccggccccgcgcgcatcaagacc
tcgctgcaactgcccggcgagatcaagttcaacgaagaccgcacggcccacgtggtgccg
cgcgtggcgggcgtggtcgacagcgtgtcggccaacctggggcaagaggtgaagcgcggg
caggtgctcgcggtgctgtcgagcccggggctctcggagcagcgcagtgcgttgcaatcg
gcgcagcgccggctggaactggcgcgcaccacctacgagcgcgagaagaaactctgggaa
gaaaagatctcgccgcaacaggattacttgcaggcgcagcaagcgatgcaggaagcgcag
atcgccgtggccaatgccaaccagaagctgctggcgctcggcgccacgccgggctcggcc
gcgctcggccgttacgagctgcgcgcgcctttcgacggcatggtggtcgagaagcacatc
tcgctcggcgaatcggtgggcgaggcggtcaacgtcttcaccatctccgacctctcgacc
gtgtgggccgagatcagcgtggcggccaacaacctgaacctggtgcgcatcggcgagccg
gtgaccattcgttccagcgccttcgaccagacggccagcggcaccgtgtcgtacgtgggc
tcgctcatcggtgcgcagacgcgcacggccacggcgcgcgtcacgttgaccaatccgcag
cgcgtgtggcgcccgggcctgttcgtgaacgtggagctggtgtcgtccgaggcggacgcg
cccgtcaccgtggcggcggaggcggtgcagacggtggaagaaaaacccaccgtcttcctc
aaggtgcccggcggcttcatgccgcagcacgtgcagaccggccgcagcgacggcaagcgc
atcgagatcgtcggcggcctgaagcccggagcagcgtatgccgcaagcggcagcttcgtc
atcaagtcgcagcagggcaagagctccgccacgcacacccactga
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