Variovorax paradoxus EPS: Varpa_4142
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Entry
Varpa_4142 CDS
T01392
Name
(GenBank) YadA domain-containing protein
KO
K21449
trimeric autotransporter adhesin
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4142
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_4142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
ADU38312
UniProt:
E6V716
LinkDB
All DBs
Position
complement(4469631..4471094)
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AA seq
487 aa
AA seq
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MAIGSASGTSQGAVASGNASTAIGGASNGASGAAALATGSVAIGSGSQVASGANGSVAIG
ANAVATAANTVSFGSAGQTRGLVNVSAGAVNATSTDAVNGGQLHTVQQSATAAQNTANAA
LGAAQNSAQYGAGGTSLQLNANGGAGTVISNVGAGQVATDAANVGQLNTVKQTADTALGA
AQNSAQYGAGGTSLQLNANGGAGTTISNVGAGQAATDAANVGQVQQAQQGAVTTANNFTV
QQVTALQALMNQALSSGVCAVGAGGAVACGPGASAGGAGSTSMGTNAQANGENTVAIGNG
AKADHAGSVAIGAGARALADPTTAVGNNAVAAGNNAVALGANTLATGSNSVALGQGSVAD
RDNTVSVGNAATNQLRGIANVAPGVLGTDAVNVNQLQQVVGNATSQANAFAARGVAAALA
MPSMPTLAVGKKWMGAAVGNYAGASAIGFAFGYQLNDNLNLGLGVSTATSSGSGNRIAAR
VQAGYAW
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcggaagcgcgtcgggcaccagccagggtgccgtggcgtccggcaatgccagc
acggcgatcggcggcgcgagcaacggcgcttcgggcgcggcggcgctggcaaccggcagc
gtggccatcgggtcgggcagccaggtcgcaagcggcgcgaacggaagcgtggccattggc
gcgaacgccgtcgccaccgcggccaataccgtttcgttcggctcggccggccagacgcgc
ggtctggtcaatgtcagcgccggcgcggtgaacgccacgagcaccgatgccgtcaatggc
ggccagctgcacacggtgcagcagagcgccaccgcggcacagaacacagccaatgcggcg
ctcggcgcggcacagaattcggcgcagtacggcgcgggcggcacttcgctgcagctcaat
gccaacggcggcgccggtaccgtcatcagcaacgtcggtgcggggcaggtcgccacggat
gccgccaacgtcggccagctgaacacggtgaagcagaccgccgacaccgcactcggcgcg
gcacagaactcggcgcagtacggtgcgggcggcacctcgctgcagctcaacgccaacggc
ggcgccggtaccaccatcagcaacgtcggcgcggggcaggcggctaccgatgccgccaat
gtcggacaggtgcagcaggcgcagcagggggcggtcaccacggcgaacaacttcaccgtg
caacaggtcaccgcattgcaggccctgatgaaccaggccttgagcagcggcgtctgcgcg
gtgggtgcgggcggtgccgtggcctgcggtcctggcgccagtgcgggtggcgccggcagc
acctcgatgggcaccaacgcgcaagccaacggcgagaacaccgtcgcgatcggcaacggc
gcgaaggccgatcacgcgggctcggtcgccatcggcgcgggtgcccgggcgctggccgac
ccgaccaccgccgtgggcaacaacgccgtggcggccggcaacaacgcggtcgcgctgggt
gccaacacacttgccacgggcagcaattcggtggcgctgggccagggctcggtggccgac
cgcgacaacacggtgtcggtgggcaatgcggcaaccaaccagttgcgcggcattgcgaat
gtcgcacccggcgtgctgggaaccgacgccgtcaacgtcaatcagctgcaacaggtggtc
ggcaacgcgaccagccaggcgaatgccttcgcggctcggggcgtcgccgctgcgctggcc
atgccgtcgatgccgacgctggcggtgggcaagaaatggatgggcgccgccgtgggcaac
tacgccggtgcatcggccatcggcttcgctttcggctaccagctcaacgacaacctgaac
ctggggctgggcgtttccacggcgaccagcagcggcagcggcaaccggattgcggcgcgc
gtgcaggcgggctacgcctggtga
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