KEGG   Variovorax paradoxus EPS: Varpa_4153
Entry
Varpa_4153        CDS       T01392                                 
Name
(GenBank) efflux transporter, RND family, MFP subunit
  KO
K07799  membrane fusion protein, multidrug efflux system
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Varpa_4153
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_4153
Transporters [BR:vpe02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Varpa_4153
SSDB
Motif
Pfam: Biotin_lipoyl_2 HlyD_D23 HlyD_3 Biotin_lipoyl PBP1_TM DUF2486
Other DBs
NCBI-ProteinID: ADU38323
UniProt: E6V727
LinkDB
Position
complement(4488074..4489690)
AA seq 538 aa
MDPKTPPEPLPPIVSPTHPPAQRRRWLGWLLTLALLVALGGGAWYLIQRSKAPAAGPGGP
GGPGAGRPGGGPGGRGGGGASANTVGVATARQADIPVQLEALGTVTPLANVTVQPQVSGV
LTEVLFKEGQMVKKGDVLATIDPAPFQNALAQASGARQRDEAQLAAARVTLQRYQTLLTQ
DSIARQDVDTQAALVKQLEGTVAIDRANEGTAKLNLTWSRITAPVSGRIGLRPVDAGNYI
STGTTGGVAVITQIAPIDVEFSVPQDRVPEVQERLAQGAQLEATAFDRTRTRQLAKGMFS
TLDNLVDTQTGTVKSKARFSNADGALFPNQFVNLRLLLRTVSSAVVVPVTALRHGPNGDY
VYVINEDNTVSQRPVTRGESSVDNVAVMSGLKAGEQVVTEGGDRLKDGARVQTQADRPAT
PASGAAAGTHRRRQGGGNGAGAKAGGQAPAAATAPAPGTAAAPAAGAAATPPAAAAAPAP
AAAAKLPTAEQRQRMLDSAKDNPEQLERRKRFLEALDKGDPAALERWQRMSERQGKTE
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggaccccaaaactccccccgagcccctgccgcccatcgtgtcgccgacacatcctccg
gcacagaggcggcgctggttggggtggttgctgaccctggcgctgctggtggccctggga
ggcggtgcctggtatctgattcagcggtcgaaagcccccgcggcgggaccgggcggtccc
ggtggtccaggtgccgggcgtccgggcggcgggccgggcggacgaggcggcggcggggcg
tccgccaacacggtcggcgtcgccaccgcgcggcaggccgacattccggtgcagctcgag
gcgctgggcacggtcactccgctggccaacgtcaccgtgcagccgcaggtctcgggcgtg
ctcaccgaggtgctcttcaaggaagggcagatggtcaagaagggcgacgtgctcgccacc
atcgatccggcaccgttccagaacgcgctggcgcaggcctcgggtgcacgccagcgcgac
gaggcccagctggccgccgcgcgcgtcaccttgcagcgctaccagacgctgctgacccag
gactccatcgcgcggcaggatgtcgacacgcaggccgcgttggtgaagcaactcgaaggc
actgtcgcgatcgatcgcgccaatgaaggcacggccaagctcaacctcacctggagccgc
atcaccgcgccggtgagcggacgcatcggcctccggccggtggacgcgggcaactacatc
tcgaccggcaccacgggcggcgtggcggtcatcacgcagatcgcgcccatcgacgtcgag
ttctccgtgccacaagaccgcgtgcccgaagtgcaggagcgtcttgcgcagggcgcgcag
ctcgaggccacggccttcgaccgcacccgcacccgccagctcgccaagggcatgttctcc
acgctcgacaacctggtcgacacgcagaccggcaccgtcaaatcgaaggcgcgcttctcg
aacgccgacggcgcgctgttcccgaatcagttcgtcaacctgcggctcctgctgcgcacc
gtcagcagtgccgtcgtggtgccggtgacggcgctgcgccacgggcccaacggcgactac
gtctacgtgatcaacgaagacaacacggtgtcgcagcgccccgtgacgcgcggcgaatcg
agcgtggacaacgtggccgtcatgtcgggcctgaaggccggtgagcaggtcgtgaccgaa
ggcggcgaccgattgaaggacggcgcgcgcgtgcagacccaggccgaccggccggccacc
ccggcttcgggcgccgcggcgggcacccaccggcgccgccaaggtggcggcaacggtgcg
ggcgcgaaggcgggaggccaggcgcctgccgcagccaccgcgccggcacccggaaccgcc
gccgccccagccgccggtgcagccgcaacgccaccggccgctgcggcagcgccggcgcct
gcagccgcagccaagcttcccaccgccgagcagcgccagcgcatgctcgattcggccaag
gacaaccccgaacagctcgagcgccgcaagcgtttcctcgaagcgctcgacaagggcgat
ccggcggcgctggagcgctggcagcgcatgtcggaacgtcagggaaaaacggaatga

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