Variovorax paradoxus EPS: Varpa_4171
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Entry
Varpa_4171 CDS
T01392
Name
(GenBank) ammonium transporter
KO
K03320
ammonium transporter, Amt family
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4171
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_4171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ammonium_transp
Fzo_mitofusin
DapB_N
Motif
Other DBs
NCBI-ProteinID:
ADU38341
UniProt:
E6V745
LinkDB
All DBs
Position
complement(4504459..4505661)
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AA seq
400 aa
AA seq
DB search
MDALKQGADALFILLGAIMVLAMHAGFAFLELGTVRKKNQVNALVKILVDFSVSTIVYFL
VGYGVAYGTHFFVGATELAAKSGYELVKFFFLLTFAAAIPAIISGGIAERAKFWPQLIAT
AVIVGVVYPLYEGIAWNKAFGIQAWIASVTGHEFHDFAGSIVVHAVGGWLALPAVILLGA
RRNRYRGDGSLSAHPPSSIPFLALGAWVLCVGWFGFNVMSAQSIDKISGLVAVNSLMAMV
GGTLVALALGKNDPGFVYNGPLAGLVAVCAGSDLMHPLGALVVGGVAGGIFVVMFTLTQN
KWKIDDVLGVWPLHGLCGTWGGIAAGIFGTQALGGIGGVNVWAQLIGTVIGVVWALVGGA
VVYGTLKATMGLRLSQEEEYDGADLSIHHISATPEREVNW
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggacgcactcaaacagggcgcagatgcgctattcatccttctcggcgccatcatggtg
ttggccatgcatgccggttttgcctttcttgaactgggcaccgtgcgcaagaagaaccag
gtcaatgcgctggtgaagatattggtcgacttctcggtctcgaccatcgtgtatttcctg
gtgggctacggcgtggcctacggcacgcacttcttcgtgggcgccaccgagctcgcggcc
aagagcggctacgagctggtgaagttcttcttcctgctgacctttgccgcggccattccg
gccatcatttcgggcggcatcgccgagcgcgccaagttctggccgcagctcatcgccacc
gcggtgatcgtcggcgtggtgtatccgctctacgagggcatcgcctggaacaaggccttc
ggcatccaggcctggatcgcctcggtcaccggccacgagttccacgacttcgccggttcg
atcgtggtgcacgccgtgggcggctggctcgcgctgccggcggtcatcctgctcggcgcg
cgccgcaaccgctaccgtggcgacggctcgctgagcgcgcatccgccgtcgagcatcccc
ttcctcgcgctcggcgcgtgggtgctgtgcgtgggctggttcggcttcaacgtgatgagc
gcgcagagcatcgacaagatctcgggcctcgtggccgtcaactcgctgatggcgatggtc
ggcggcacgctggtggcgctggccctgggcaagaacgacccgggcttcgtctacaacggc
ccgctcgcgggtctcgtggccgtgtgcgccggctccgatctcatgcatccgctgggcgcg
ctggtcgtgggcggcgtggcgggcggcatcttcgttgtcatgttcacgctcacgcagaac
aaatggaagatcgacgacgtgctcggcgtctggccgctgcacggcctgtgcggcacctgg
ggcggcatcgcggccggcatcttcggcacgcaggcgctgggcggcatcggcggggtgaac
gtttgggcgcagctgatcggcacggtgatcggcgtggtctgggcgctcgtcggcggcgcg
gtggtgtacggcacgctcaaggccacgatgggcctgcgcctctcgcaggaagaggaatac
gacggcgccgacctgtcgatccaccatatctcggccacgccggagcgcgaagtcaactgg
taa
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